Gene Clim_0105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0105 
SymbolpyrG 
ID6355817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp110890 
End bp112599 
Gene Length1710 bp 
Protein Length569 aa 
Translation table11 
GC content53% 
IMG OID642667729 
ProductCTP synthetase 
Protein accessionYP_001942190 
Protein GI189345661 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID[TIGR00337] CTP synthase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000148991 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGAC CAAAAAATGT AAAGCATATT TTTGTTACCG GAGGGGTGAT CTCCTCGCTT 
GGCAAGGGAA TTCTGTCCGC ATCTCTCGGG ATGCTGCTCA AGTCCCGGGG TTTGAGGGTA
GCCATACAGA AATATGATCC CTATATCAAC GTCGATCCCG GTACCATGTC GCCCTACCAG
CATGGCGAGG TGTATGTTAC CGATGACGGC GCTGAAACCG ATCTGGATCT CGGTCACTAC
GAGCGCTTTC TTGACGAATC GACCTCTCAG TCGTCGAATC TCACCATGGG GCGCGTCTAT
AAATCGGTTA TCGATAAAGA GCGTCGCGGG GAATATCTCG GAGGAACCGT ACAGGTGGTT
CCCCATGTGA TCGACGAGAT CAAGGACCGT ATGGCCGAGC TTGCCAAAAA CGGCAACCTC
GATGTGCTCA TCACCGAAAT CGGCGGGACG ATCGGCGACA TCGAATCCCT TCCGTTTCTT
GAGGCCATGC GCCAGATGAA GCTTGAAATG GGTGAGCGGA ACCTGCTCAA CATTCATCTC
ACCTTTGTTC CCTACATCAA GGCGGCAAGC GAACTGAAAA CCAAGCCTAC GCAGCACAGC
GTGAAAATGC TGCTCGAAAC CGGAATCCAG CCGGATATCC TGGTCTGCCG GAGCGAGAAG
CCGCTCTCCC GCGAAATCAA GAACAAGGTC GGCCATTTCT GTAACGTCAA CGACCTCGAC
GTTATAGGGC TCAACGATTG CGATACGATT TATGAAGTGC CGCTCATGCT GCTCAAGGAG
AAGCTCGATC TCAGGGTGAT GAAGAAGCTT GGTCTGAAAA AATTCAAGGA ACCAAACCTC
ATTTACTGGA GGGAGTTCTG CGACAAGGTG AACCATCCTC GTGATGGCGA GATCACCATC
GGCATCTGCG GTAAATACAC CGAGTACCCC GACGCCTATA AATCCATTAT CGAGTCGTTC
GTGCATGCCG GTGCCAGTAA CAACGTTCGG GTGAACATCC GGCTGCTCAA GGCGGAAGAC
GCCGAGGGCA AGACGTTCGA TTTTGCGAAG GAGCTTGAAG GCGTCAGCGG CATTCTCGTC
GCTCCCGGAT TCGGCGACAG GGGCATTGAA GGCAAGATCC AGTATATACG CTACGCAAGG
GAGCAGAACA TACCCTTTTT CGGCATATGC CTCGGCATGC AGTGCGCGAC CATCGAATTC
GCCCGTAATG TATGCAATCT GCAGGAGGCC AACTCTACCG AGTTCAACAA GCGTACCCGC
TATCCGGTCA TCGACCTTAT GGAGCACCAG AAAAAGGTCA AGGAGAAGGG CGGAACCATG
CGTCTGGGAA GCTATCCCTG TATTCTCAGG GAGGGTTCAC GGGCTTACGC CGTCTATCAG
AAATTTCTTA TCAATGAACG GCACCGGCAC CGGTACGAGT TCAACAACAC CTTCCGCAAG
CCCTTTGAGG AGAACGGGAT GATCTTTTCC GGCACATCGC CGAACGGCGA ACTTGTCGAG
ATTGTGGAAC TTGCAAACCA TCGCTGGTTT GTAGGGGTTC AGTTCCATCC GGAGCTGAAA
TCAAGAGTGC AGAAGGTGCA TCCTCTCTTT CACGGTTTCG TCGAAGCGGC AAAGGAGTAC
AGTTTCGGCA AACGGCAGAT GGAACTGCCG GTAGAGCGCT CTGCGGAGAT GCCGTCGTTT
ATGCCGGCTG AAAGCGATAT GGGGCAGTAA
 
Protein sequence
MARPKNVKHI FVTGGVISSL GKGILSASLG MLLKSRGLRV AIQKYDPYIN VDPGTMSPYQ 
HGEVYVTDDG AETDLDLGHY ERFLDESTSQ SSNLTMGRVY KSVIDKERRG EYLGGTVQVV
PHVIDEIKDR MAELAKNGNL DVLITEIGGT IGDIESLPFL EAMRQMKLEM GERNLLNIHL
TFVPYIKAAS ELKTKPTQHS VKMLLETGIQ PDILVCRSEK PLSREIKNKV GHFCNVNDLD
VIGLNDCDTI YEVPLMLLKE KLDLRVMKKL GLKKFKEPNL IYWREFCDKV NHPRDGEITI
GICGKYTEYP DAYKSIIESF VHAGASNNVR VNIRLLKAED AEGKTFDFAK ELEGVSGILV
APGFGDRGIE GKIQYIRYAR EQNIPFFGIC LGMQCATIEF ARNVCNLQEA NSTEFNKRTR
YPVIDLMEHQ KKVKEKGGTM RLGSYPCILR EGSRAYAVYQ KFLINERHRH RYEFNNTFRK
PFEENGMIFS GTSPNGELVE IVELANHRWF VGVQFHPELK SRVQKVHPLF HGFVEAAKEY
SFGKRQMELP VERSAEMPSF MPAESDMGQ