Gene Clim_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0103 
Symbol 
ID6355627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp108050 
End bp110536 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content55% 
IMG OID642667727 
ProductDNA gyrase, A subunit 
Protein accessionYP_001942188 
Protein GI189345659 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.29696e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGCG AACGGATATT GCCGATCAGT ATTGAAGAGG AGATGCGGGA TTCCTATCTC 
GATTATTCCA TGTCGGTTAT CGTCAGCCGC GCGCTTCCTG ATGTTCGTGA CGGCCTGAAG
CCGGTGCATC GCAGGGTGTT GTACGGTATG CACGAGCTGG GACTCCAGGC GGGCAAGCCG
CACAAGAAGT CGGCCCGTAT TGTCGGTGAA GTGCTCGGCA AGTTCCATCC GCATGGCGAC
AGTGCGGTCT ATGACAGTCT TGTACGACTG GTGCAGGACT TTTCCCTGCG CTATCCCCTG
ATCGACGGTC AGGGAAACTT TGGTTCCGTC GATGGCGACT CCCCTGCTGC GATGCGTTAT
ACCGAGGTGC GCATGAAGCC TATCGCCGGT GAAATGCTCA AGGATCTCGA TAAGGAGACA
GTTGATTTTT CCCTTAACTT CGACGATTCG CTCGAAGAGC CTACGGTGCT TCCTTCAGCG
ATACCTAACC TGCTCGTTAA TGGCTCATCC GGCATTGCCG TCGGCATGGC GACCAACATT
CCTCCGCAGA ACCTGCGCGA GGTCGTTGAC GGCATCATCG CGGTCATAGA GAATCCCGAG
ATCGAGATCG CCGATATCAT GAAGCACGTT ATCGCTCCCG ATTTCCCGAC CGGAGGGATC
ATCTACGGTT ACGAAGGCGT TCGCCAGGCC TATCTGACAG GACGCGGCAA GGTGGTGATT
CGCGCAAGGG CCCTTGTCGA GGTGACCCAG AAGAACGGCC GCGAGTCCAT TATCGTTACC
GAACTTCCCT ATCAGGTCAA CAAGGTCCGT CTGATCGAGA AGATCGTCGA GCTTGTTCAC
GATAAAAAAC TTGACGGTAT CGCCGACATC CGCGACGAGT CGGACCGTGA CGGCATGCGG
CTCGTGATAG AACTCAAACG CGATGCCGTA GCCAAGGTGG TGCTGAACAA CCTGTACAAG
CACACCCCTA TGCAGGAGAC CTTCGGGGTG ATCATGCTTG CCCTTGTGGA CGGCGTGCCG
AGGGTGCTCA ATCTCAAGGA GATGATGCAC TACTATGTCA AGCACCGGAA CGAAATTGTG
CTGCGCCGCA CGCAATTTGA CCTCACTGCC GCCGAAAAGC GGGCACATAT TCTTGAAGGT
CTGAAAATCT GTCTCGATAA TCTCGACGAG GTGATCACCA CCATCCGCGA GTCGCCGGAC
ACCTCTACGG CTCAGGAGCG TCTTATGGAG CGCTTCGGGC TTTCCGAGAT ACAGTCAAAG
GCCATTCTTG AAATGCGTCT GCAGCGCCTT ACCGGCATGG AGCGGAAAAA GATCGATACG
GAATATCAGG AAACCCTTCT TCTTATCGAC GGCCTGCGTT CCATTCTCGC CAGTCCGCAG
AAACAGATGC AGATTATCCG CGAAGAGCTG CTGAAGGTGA GAGAGGTTTA CGGTGACGAG
CGCCGTACTG AAATTGTGCC TCAGGAGGGT GATTTCTCCA TCGAGGATAT GATCGCCCAG
GAGGATGTGG TCATCACCAT CACCCACGAC GGCTTTATCA AACGCTTTCC GGTTTCCGGA
TACCGCCGTC AGGCAAGAGG TGGCAAAGGG GTTACCGGCG CGCAGGCGAA ACATGATGAC
TTCATCGAAC ACATGTTCAT CGCCTCGACG CACAACTATA TTCTTTTCTT TACCAATACA
GGTCGCTGTT ACTGGCTCAA GGTTTACGAA ATTCCCGAAG CGGGCCGAGC CGCCCGCGGA
CGTTCGCTGG CCAACATCAT GGAGCTTCGC CCTACTGAAC AGATCAAGGC ATACATCAAT
ATCCGCAACT TCGAGGATCC GGGGTACATT GTGATGGCCA CGACCAACGG TATCGTCAAG
AAAACGCCCC TCGACGATTT CTCGAACCCG CGCAGAACAG GCATTGCCGC CATCACCATC
GAAGAGGGAG ACGAACTGCT CGATGCCCGC CTGACCGACG GCGACCATCA GATCATTCTC
GCGAAAAGCT CGGCCTATGC GGTGCGCTTT CCTGAAAACG AGATCCGTTC CATGGGCAGA
ACCGCCATGG GCGTCAAGGG CATCACCCTC GACGAGGGAG AGAAGTGTAT TTCAATGGTC
ACAACAAAGC GGACGGATAC CGCATTGCTC GCCGTTACCG ACAACGGGTT CGGCAAGCGC
AGCCGTGTCG AGGACTACCG CCTTACCAGA AGAGGCGCAC GAGGAGTCAT TACCCTCAAG
GCGCATGAGA AGATCGGAGC GCTGGTCGGT CTTATCGATG TCAATGACGA TGACGATCTC
ATCATCATTA CCACGAACGG CATCGTGAAC CGCCAGCATG TATCGGATGT AAGGATGACC
GGTCGGAATA CTTCAGGCGT AAGGCTTATC AGGCTTATGG CAGGCGACAA GATTTCAGCT
CTGGCAAGGG TTCCGAAAAG TGATGAAGAG GTTGATTCCG ATTCCATCAT CGAGGATGCC
GACGGTCAGA TTGATCTTTT TGTTTGA
 
Protein sequence
MQRERILPIS IEEEMRDSYL DYSMSVIVSR ALPDVRDGLK PVHRRVLYGM HELGLQAGKP 
HKKSARIVGE VLGKFHPHGD SAVYDSLVRL VQDFSLRYPL IDGQGNFGSV DGDSPAAMRY
TEVRMKPIAG EMLKDLDKET VDFSLNFDDS LEEPTVLPSA IPNLLVNGSS GIAVGMATNI
PPQNLREVVD GIIAVIENPE IEIADIMKHV IAPDFPTGGI IYGYEGVRQA YLTGRGKVVI
RARALVEVTQ KNGRESIIVT ELPYQVNKVR LIEKIVELVH DKKLDGIADI RDESDRDGMR
LVIELKRDAV AKVVLNNLYK HTPMQETFGV IMLALVDGVP RVLNLKEMMH YYVKHRNEIV
LRRTQFDLTA AEKRAHILEG LKICLDNLDE VITTIRESPD TSTAQERLME RFGLSEIQSK
AILEMRLQRL TGMERKKIDT EYQETLLLID GLRSILASPQ KQMQIIREEL LKVREVYGDE
RRTEIVPQEG DFSIEDMIAQ EDVVITITHD GFIKRFPVSG YRRQARGGKG VTGAQAKHDD
FIEHMFIAST HNYILFFTNT GRCYWLKVYE IPEAGRAARG RSLANIMELR PTEQIKAYIN
IRNFEDPGYI VMATTNGIVK KTPLDDFSNP RRTGIAAITI EEGDELLDAR LTDGDHQIIL
AKSSAYAVRF PENEIRSMGR TAMGVKGITL DEGEKCISMV TTKRTDTALL AVTDNGFGKR
SRVEDYRLTR RGARGVITLK AHEKIGALVG LIDVNDDDDL IIITTNGIVN RQHVSDVRMT
GRNTSGVRLI RLMAGDKISA LARVPKSDEE VDSDSIIEDA DGQIDLFV