| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0101 |
|---|
| Symbol | |
|---|
| ID | 6355625 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 106810 |
|---|
| End bp | 107490 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642667725 |
|---|
| Product | peptidase M22 glycoprotease |
|---|
| Protein accession | YP_001942186 |
|---|
| Protein GI | 189345657 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.000448145 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACTTAC TGGCCATTGA GTCTTCGCAT GCCTCCCTCA GTGTTGCCGT CAGCAGCGAT
GGCGGGGTAT TTGAGCTTTG CGGCAGCGAG TGGAGCCGGG CTGCCGAGAC CATCATGCCG
CTTGTGCAGC AGGTGCTTCT GAACAGTCAT ACCGAAAAAG AGCGGCTCGA TGCGGTGGCG
GTCTCTTCAG GTCCGGGTTC GTTTACCGCA TTGCGTATCG GCATGTCGGC GGCTAAAGGT
ATTGCGTACG GGCTTGGCAT TCCTCTTGTT TCAGTCCCTA CCCTGCCGGC CATGGCGGTT
GCCGCAATGG CCTGTACCTC TGCCGGAGCG ATCGTTCCGT TCATTCCCTC ACGCAGGGGG
GAGTATTATT ATGCATGTTA CTCGCGCGTT CTGCTTGAAA AAGGGATGGC GGGCAACGAA
TCGGCAAGAG GATCTGCCGA AGATGTTGTT GCCGCAGCCT GCGGCATGGG CCCCGGAACC
GTCATTACGG CCAGGCACGC TGCAGATTTT TCGACTCTGC CGGAATGCGG CGAAGTCTGT
TTTCTCGATG CGTCATTTTT CTCTGCGGCC TCGCTTCTGC CTGAAGCCAT AAGGCTTTTC
GGGCTTGGAA GCACACAGTC ACCGGCCGAT GCGTCGCCTG ATTACCGGCA AATGTTTATG
CCGGGAGGAA GAAAAGAGTG A
|
|---|
| Protein sequence | MNLLAIESSH ASLSVAVSSD GGVFELCGSE WSRAAETIMP LVQQVLLNSH TEKERLDAVA
VSSGPGSFTA LRIGMSAAKG IAYGLGIPLV SVPTLPAMAV AAMACTSAGA IVPFIPSRRG
EYYYACYSRV LLEKGMAGNE SARGSAEDVV AAACGMGPGT VITARHAADF STLPECGEVC
FLDASFFSAA SLLPEAIRLF GLGSTQSPAD ASPDYRQMFM PGGRKE
|
|---|
| |