| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0084 |
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| Symbol | |
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| ID | 6355607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 89837 |
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| End bp | 91198 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642667707 |
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| Product | membrane-associated zinc metalloprotease |
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| Protein accession | YP_001942169 |
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| Protein GI | 189345640 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.47842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCC TGAATACAAC GTTTTTTTTC ATTGTCGCCA TTTTCATTCT GGTCACGGTC
CATGAACTTG GCCACTTTCT GACCGCAAAG CTTTTCGGCA TGCGGGTCGA TAAATTCTAT
ATCGGATTCG ATTTCTTCAA CCTGAGACTC TGGAAAAAGA AAATCGGCGA AACGGAATAC
GGTATCGGAG TATTTCCGCT CGGAGGATAT GTAAAAATAG CGGGGATGGT GGACGAAAGT
CTTGACACCA CCTACCAGTC GTCGGAACCC GAACCCTGGG AGTTCAGGGC CAAACCGGTC
TGGCAGCGCC TGATCGTGCT CGCCGGCGGC GTAGGGATGA ACATCGTGCT CGCCGCGGCT
ATCTTTACCG GCGTCACGCT CATGTTCGGA GAATCGCGCA CGACGGTCAA CAACCCCGCG
TACATCGAGA AAGGGTCGGT CTTCGCCGTA ATGGGCATGC AGACCGGCGA CCGGATTGCC
GCCGTCAACG GCAAGGAGGT TGCAAGCTGG GAAGAGGCTC TCGATCCGGC ATCGTTTACC
GCATCGTCGC TGAACTATAC GGTACTGCGC GATGAAAAAC GGTTGACGCT TGCAGCCCCG
GCCAACATTC TTTCGCTGCT CAACGAAAAC AAGCCCCTCG GCATACGTCC GCTCATGCCT
CCGGTCATCG ACGATGTTCT TGCGAACGAT CCGGCAGCAA AAGCCGGCAT AAAGCCCGGC
GCGCTCATAA CCGCCATTAA CGGCAAACCC GTTTCCGATT GGACTGAGGT GGTTTCCGTC
ATCTCCGCAC ATGCAGGAAA ACCGATCGCA ATAACCTGGA AATACCTCGA ACCGGTTCCA
GGCAAAGCAA CCGATCCTGC AGCAATTCTC GCGTCCGGCA CTCCCGTCGT AACCGAAGTC
GTGCCTACCG CTGCCGGTAA AATCGGTATA GCGCTCCGCC AGACACTGGA AACCGAACGT
ATCAGCCTGA ACGTTTTCGA GTCGATCGGC AGCGGCACCT CGCAGACCTG GAAAATGAGC
GTTATGACCG TACAGGGATT CGCAAGAATC TTCACCGGAC AGGAGGATTT CCGCAAATCG
CTGGGCGGAC CGGTGAAAAT TGCAAAAATT GCCGGTCGCA GCGCCGAACA GGGCCCAATC
AGCTTTCTGT ACTTTCTGGC CGTCCTCTCC ATATCGCTGG CCATCATCAA CATCCTGCCC
ATTCCGGCGC TTGACGGCGG ACAGTTTGTC ATGAATGCCA TCGAGGGCAT CATCGGACGC
GAACTGCCTT TCGAAGTTAA GATGCGTATT CAGCAGATCG GCATGGCGCT GCTTCTGACG
CTCTTCGTCT ATATTCTCCT GAACGACATC ATCAACCCGT GA
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| Protein sequence | MDILNTTFFF IVAIFILVTV HELGHFLTAK LFGMRVDKFY IGFDFFNLRL WKKKIGETEY
GIGVFPLGGY VKIAGMVDES LDTTYQSSEP EPWEFRAKPV WQRLIVLAGG VGMNIVLAAA
IFTGVTLMFG ESRTTVNNPA YIEKGSVFAV MGMQTGDRIA AVNGKEVASW EEALDPASFT
ASSLNYTVLR DEKRLTLAAP ANILSLLNEN KPLGIRPLMP PVIDDVLAND PAAKAGIKPG
ALITAINGKP VSDWTEVVSV ISAHAGKPIA ITWKYLEPVP GKATDPAAIL ASGTPVVTEV
VPTAAGKIGI ALRQTLETER ISLNVFESIG SGTSQTWKMS VMTVQGFARI FTGQEDFRKS
LGGPVKIAKI AGRSAEQGPI SFLYFLAVLS ISLAIINILP IPALDGGQFV MNAIEGIIGR
ELPFEVKMRI QQIGMALLLT LFVYILLNDI INP
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