| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0071 |
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| Symbol | |
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| ID | 6355594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 74626 |
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| End bp | 75951 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642667694 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001942156 |
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| Protein GI | 189345627 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01844] type I secretion outer membrane protein, TolC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGA CGCTCAAACG ACATGCCGGC ATTGCCGCCG CGGCACTGAT GCTCACCTTT
CCGCCCCGGC TTGAAGCCGT TGCGGAACCT GCTTCTGCCC GGCTCACGCT TGAAGAAACC
ATCCGGCTGG TCAGAGAAAA CAACCCGGCC CTGAAAGCCG CCTCCGAAGA GGTCAATGCC
GCGGATGCCC GCATCCGGCA GCAGAAAAGC GCATATTACC CGCAGATAAC CGCGAGTGCG
GGATATACCT GGATCGACCC GGTCTCCGAA ATGGGGTTCG GCGGAAGCGA ACCGATACAG
TTCATGCCGA ACGACAACTA CGAGGCGAAA GTCACCGCCA GAGCGACCCT GCTCGATTTC
GGCAAACGGG GAATCGAGGT CGATATGGCC CGAACAGGAA AAAACGCCGC GGGGCACACT
TTCGAAATTA TCCGGCGCGA CCTCTCCTAC CGGACGGTAG AGCTTTTCTA CGGCATACTC
TTCCTCCGCG AAAGCATCCG GGTGGAGGAG AAGGAGATTG CGGCCCTGCA GAAAGCTTTC
GACTATACGA CAAAACGATA CCAGGCCGGC ACGGCGACAA AATTCGATGT GCTCTCGACC
GACGTGCGCA TACAGGCTGC GCGCTCGAAA AAGCTCGGAC TGGAACATCA GCTTCGTCGC
CATGAGCTTA CCCTTCACCG TCTGACCGGA CTGGCCGCCA ATACGCCGCT CGACCTCAAA
GGCTCGTTCT CCGTCCATCC GGAAAATCCT GACGAAACGA CGCTTGTCGC CGCCGCGGTC
AGGCAGCGCC CGGAAGTACT GCTTGCCGGC GAAAACGAAC AATCCGCCAG ACTCCGCCGC
TCGCGTTCCA TGAAGGAAGG GCTGCCGGTA GTGCGCGCAA GCGCTTCTTG GGGAGTAAGC
AACGGCTATC AGCCGGATAT CGACGAAATC CGCGAAAACG TGGCGGCAGG CATCCATATG
GAGCTTCCGC TCTTTACCGG GTTCCGCACC TCGGCGGAAC GGCAGGAGGC CGCTGCCCTG
CTCCGCGCAG CAGCACAGCG CAGGCTCGAT ACCGAAGAAC AGATTGCGAC GGAAGTTGCA
GAAACCCTTC ACGCCCTCGA TACGGCAAGG GAAAAGATAC TCACCACCGA ATCGCAGGTG
CGGCAGGCAA AGCTCGCCGC CGAACATGCG CGGGCACGCT ATGAAAACGG CATAGCGACA
ACCCTCGACC TGCTCGATAC CGAAGCCGCT CTTGCCCAGG CAGAACTTGC CCGGCTGCAG
GCGGCATACG ACTACGTGCT CAACAACTAC ACCCTTAAAC GGGCAACCGG GGAGATATTC
TGGTAA
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| Protein sequence | MKKTLKRHAG IAAAALMLTF PPRLEAVAEP ASARLTLEET IRLVRENNPA LKAASEEVNA
ADARIRQQKS AYYPQITASA GYTWIDPVSE MGFGGSEPIQ FMPNDNYEAK VTARATLLDF
GKRGIEVDMA RTGKNAAGHT FEIIRRDLSY RTVELFYGIL FLRESIRVEE KEIAALQKAF
DYTTKRYQAG TATKFDVLST DVRIQAARSK KLGLEHQLRR HELTLHRLTG LAANTPLDLK
GSFSVHPENP DETTLVAAAV RQRPEVLLAG ENEQSARLRR SRSMKEGLPV VRASASWGVS
NGYQPDIDEI RENVAAGIHM ELPLFTGFRT SAERQEAAAL LRAAAQRRLD TEEQIATEVA
ETLHALDTAR EKILTTESQV RQAKLAAEHA RARYENGIAT TLDLLDTEAA LAQAELARLQ
AAYDYVLNNY TLKRATGEIF W
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