Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0069 |
Symbol | |
ID | 6355592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 73156 |
End bp | 74151 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642667692 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001942154 |
Protein GI | 189345625 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGAAA AGGAAAACAA TGCCGCAACG GCGGAAAAAA ACGGAAAAGA CCTCCTGAAA GCATCCAATC CCCTGCGCCT TGTCATAACG GTCGTTCTCG TTCTGGTAGC GCTCATCTGG GGAGGAAGCA AGATTTACCA CTCCTTCCTC TACGTCGAAA CCGACAACGC CCAGATAGAA GGGGACATTT ACCCGGTCAT CTCGCGCGTG CCCGGCAGGG TGCAGCAGGT TCTCTGTTCC GACAACCAGA AAGTCGCAAA AGGCGACACG CTGGTGCTGC TCGATCCGGC GGACTACGAA GTCAGACGGG ATATGGCCGA AGCCGCCCTC GATAACGCCC GCGCATCGGT TTCAGCCGCA GGAGAAGCCG CGCTTGCCGC CGCGGCGATC GGGCAAAAAC TCAGCGCCGA TCTCCGCAGA AGCGAAAACC TCCGCAGACA GGACGTGATT TCGCCCTCGG AGTTCGATGC CGTAAAAGCC GGCGCGCTAA CATCCTCGGC TCAGCATGCC GCGGCCGAAA GCCAGCACCG GGCCGCTGCC GCCCAGCTTA AAATGCGCGA AGCCGAACTG CGCAACGCCG GGCTGCAGCT CTCGTACACA ACCATTACCG CCCCGGCCGA CGGACACGTC TCGAAGAAAA ACGTACAGCC CGGCCAGTAC GTAGCGCCCG GCCAGCAGCT TATCGCCCTG GTCGGCAGCA AAAAGCTCTG GGTTGTAGCG AACTTCAAGG AGACGCAGCT CGAAAACATC CGGCCCGGCC AGCCAGTATC CATAAAGGTG GACGCCTACC CCGGAAAAGA GTTCGAGGGA GAGGTGGAAT CGATCTCTTC GGGAACCGGA GCGCGCTTCG CCCTGCTGCC GCCCGATAAC GCCAGCGGCA ACTTCGTCAA GGTAGCCCAG CGCGTACCGG TCAGAATCCT CTTTACCGGC AAACCCGATA ACGAGCACAA ACTCGCGGCA GGCATGAACG TGGTCGTGGA GATCAGGGTA AAATGA
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Protein sequence | MAEKENNAAT AEKNGKDLLK ASNPLRLVIT VVLVLVALIW GGSKIYHSFL YVETDNAQIE GDIYPVISRV PGRVQQVLCS DNQKVAKGDT LVLLDPADYE VRRDMAEAAL DNARASVSAA GEAALAAAAI GQKLSADLRR SENLRRQDVI SPSEFDAVKA GALTSSAQHA AAESQHRAAA AQLKMREAEL RNAGLQLSYT TITAPADGHV SKKNVQPGQY VAPGQQLIAL VGSKKLWVVA NFKETQLENI RPGQPVSIKV DAYPGKEFEG EVESISSGTG ARFALLPPDN ASGNFVKVAQ RVPVRILFTG KPDNEHKLAA GMNVVVEIRV K
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