Gene Clim_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0069 
Symbol 
ID6355592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp73156 
End bp74151 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID642667692 
Productsecretion protein HlyD family protein 
Protein accessionYP_001942154 
Protein GI189345625 
COG category[V] Defense mechanisms 
COG ID[COG1566] Multidrug resistance efflux pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA AGGAAAACAA TGCCGCAACG GCGGAAAAAA ACGGAAAAGA CCTCCTGAAA 
GCATCCAATC CCCTGCGCCT TGTCATAACG GTCGTTCTCG TTCTGGTAGC GCTCATCTGG
GGAGGAAGCA AGATTTACCA CTCCTTCCTC TACGTCGAAA CCGACAACGC CCAGATAGAA
GGGGACATTT ACCCGGTCAT CTCGCGCGTG CCCGGCAGGG TGCAGCAGGT TCTCTGTTCC
GACAACCAGA AAGTCGCAAA AGGCGACACG CTGGTGCTGC TCGATCCGGC GGACTACGAA
GTCAGACGGG ATATGGCCGA AGCCGCCCTC GATAACGCCC GCGCATCGGT TTCAGCCGCA
GGAGAAGCCG CGCTTGCCGC CGCGGCGATC GGGCAAAAAC TCAGCGCCGA TCTCCGCAGA
AGCGAAAACC TCCGCAGACA GGACGTGATT TCGCCCTCGG AGTTCGATGC CGTAAAAGCC
GGCGCGCTAA CATCCTCGGC TCAGCATGCC GCGGCCGAAA GCCAGCACCG GGCCGCTGCC
GCCCAGCTTA AAATGCGCGA AGCCGAACTG CGCAACGCCG GGCTGCAGCT CTCGTACACA
ACCATTACCG CCCCGGCCGA CGGACACGTC TCGAAGAAAA ACGTACAGCC CGGCCAGTAC
GTAGCGCCCG GCCAGCAGCT TATCGCCCTG GTCGGCAGCA AAAAGCTCTG GGTTGTAGCG
AACTTCAAGG AGACGCAGCT CGAAAACATC CGGCCCGGCC AGCCAGTATC CATAAAGGTG
GACGCCTACC CCGGAAAAGA GTTCGAGGGA GAGGTGGAAT CGATCTCTTC GGGAACCGGA
GCGCGCTTCG CCCTGCTGCC GCCCGATAAC GCCAGCGGCA ACTTCGTCAA GGTAGCCCAG
CGCGTACCGG TCAGAATCCT CTTTACCGGC AAACCCGATA ACGAGCACAA ACTCGCGGCA
GGCATGAACG TGGTCGTGGA GATCAGGGTA AAATGA
 
Protein sequence
MAEKENNAAT AEKNGKDLLK ASNPLRLVIT VVLVLVALIW GGSKIYHSFL YVETDNAQIE 
GDIYPVISRV PGRVQQVLCS DNQKVAKGDT LVLLDPADYE VRRDMAEAAL DNARASVSAA
GEAALAAAAI GQKLSADLRR SENLRRQDVI SPSEFDAVKA GALTSSAQHA AAESQHRAAA
AQLKMREAEL RNAGLQLSYT TITAPADGHV SKKNVQPGQY VAPGQQLIAL VGSKKLWVVA
NFKETQLENI RPGQPVSIKV DAYPGKEFEG EVESISSGTG ARFALLPPDN ASGNFVKVAQ
RVPVRILFTG KPDNEHKLAA GMNVVVEIRV K