| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0041 |
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| Symbol | |
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| ID | 6355564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 46674 |
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| End bp | 48521 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642667666 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_001942128 |
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| Protein GI | 189345599 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00446699 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGCGA CCGGATCGGA TTCAGCCTTG TTCGATACCC TTCGAAAGGT TTTCGGATTC
CGTGAGTTTC GCCCGAATCA GGAACGCATT GTACGGGCAA TTCTGAATAA GCGGGATGTG
TTTGCCGTTA TGCCCACCGG GGGCGGCAAA TCTCTCTGCT ACCAGCTGCC CGCAGTGCTG
CTTCCGGGAA CCTGCATGGT GATCAGCCCG CTTATCGCGC TCATGAAAGA TCAGGTTGAC
GGAGCGAGGG CCAATGGCAT CCGCGCTGCG CATCTCAACA GCTCCCTCTG CCCGGAAGAA
CGAACTGCCG TTATGCACGA CCTGCTCTCG AATTCGCTCG ACCTGCTCTA TGTGGCCCCC
GAACGCTTTA CGCTCGAGCA GTTCCGGGAG ATGCTCGGAC GGGTGAACAT CAGCATGGCC
GTAATCGACG AAGCTCACTG TATTTCGGAG TGGGGACACG ATTTCCGGCC GGACTATCTC
TCTCTTTCCG CTCTGGTCAC CCTCTTTCCC GATCTGCCGG TTACCGCCTT TACGGCTACG
GCCACGCACC TGGTGCAGCA GGATATTCTC GATAAACTCT CACTGCGCGA TCCGCTTGTC
GTCAGGGCCT CCTTTGACCG CGGCAATCTT TTCTACGACA TCCGTTTCAA GGAAAACAGC
GGGGAACAGA TTGCGGCGAT TGTGAGAAGC AATCAGGGAA AAGCCGGAAT CATCTACCGC
ACCAGCCGTA AAAACGTCAA CGACACGACG GCCATGCTTA AAGCTAAAGG GTTCAGGGCA
CTCCCCTACC ACGCCGGGTT GGGAGACGAG GAGCGCAAGC GCAATCAGGA TGCCTTCATC
CGCGATGAAG CGGACGTTAT TGTCGCCACG GTCGCATTCG GTATGGGGAT AGATAAATCG
AACATCCGCT TCGTCATCCA TGCCGACCTG CCGAAAAGCA TTGAAAATTA CTATCAGGAA
ACCGGCAGGG CCGGACGCGA CGGCGAGGCT GCGCAATGCA CGTTGCTGTT CTCGCAGGGA
GACATCCCCA AAGTGCGCTT CTTCATCGAC ACGATAACCG ATGAAGCCGA GAGGGCCCGG
GTTCTCGCCG CATTTTCAAA AGTTATCGCA TTCGCATCCA CATCGGTCTG CAGGCGGAAA
ACCCTGCTTG ACTATTTCGG TGAAACCTAC CCACACGATA ACTGCAACTC CTGTGACATC
TGCCTCGGCA CACGAGAGGT CATTGACGCC ACCACTGAGT CGCAGATGCT GCTTTCGGCA
ATCGCCCGGA CTGAAGAACG GTTCGGAGCG ACGCATATTG TGGATATTGT GACCGGAAGC
CGGAACCAGA AAATCAGGGA CTTCGGGCAT GACCGGCTTA AAACTTACGG AGTGGGAAAG
GGACGCGAAA AAAAATTCTG GCGGCAGCTG ATCGATGAGC TTCTTGCCCG GAAAGTGATC
GCGAAATCCG AGGGCCTCTT CCCTATGCTG TATCTGCTGC CAAAAGCGGT TCAGGTTCTG
AGAAACGAAG AAAAAGTCGA AATCGTCAGA GTAAGGGAAA AGAAAGCGAC CGGAAATGTA
AAGAATCTGG TGGAGGGGAG TTACGATCAT GAACTGTTTG ATCTGCTCCG GTCTCTCAGG
AAACAGATCG CCGACGAACT GGGTATTCCG CCCTATGTGG TCTTTTCCGA CCGCTCGCTG
CGCGATATGG CCTCCATTCT GCCGCAGAGC GACGAGACCA TGCTTTCGGT TTCGGGAGTC
GGAGAGGTCA AGCTTCAGCG ATATGGACAA CAGTTCCTCG CGCTCATAAA AAAATACAGA
AAAGAGCATC CGGAAGAAAC TTCCCGATTG CCGATACTGC CTCGATGA
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| Protein sequence | MQATGSDSAL FDTLRKVFGF REFRPNQERI VRAILNKRDV FAVMPTGGGK SLCYQLPAVL
LPGTCMVISP LIALMKDQVD GARANGIRAA HLNSSLCPEE RTAVMHDLLS NSLDLLYVAP
ERFTLEQFRE MLGRVNISMA VIDEAHCISE WGHDFRPDYL SLSALVTLFP DLPVTAFTAT
ATHLVQQDIL DKLSLRDPLV VRASFDRGNL FYDIRFKENS GEQIAAIVRS NQGKAGIIYR
TSRKNVNDTT AMLKAKGFRA LPYHAGLGDE ERKRNQDAFI RDEADVIVAT VAFGMGIDKS
NIRFVIHADL PKSIENYYQE TGRAGRDGEA AQCTLLFSQG DIPKVRFFID TITDEAERAR
VLAAFSKVIA FASTSVCRRK TLLDYFGETY PHDNCNSCDI CLGTREVIDA TTESQMLLSA
IARTEERFGA THIVDIVTGS RNQKIRDFGH DRLKTYGVGK GREKKFWRQL IDELLARKVI
AKSEGLFPML YLLPKAVQVL RNEEKVEIVR VREKKATGNV KNLVEGSYDH ELFDLLRSLR
KQIADELGIP PYVVFSDRSL RDMASILPQS DETMLSVSGV GEVKLQRYGQ QFLALIKKYR
KEHPEETSRL PILPR
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