Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0034 |
Symbol | |
ID | 6355557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | + |
Start bp | 39191 |
End bp | 40744 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642667659 |
Product | 4Fe-4S ferredoxin iron-sulfur binding domain protein |
Protein accession | YP_001942121 |
Protein GI | 189345592 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 [COG3301] Formate-dependent nitrite reductase, membrane component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTACG GTTTTGTTAT CGATGCCCGG AAGTGTATCG GATGCCATGC ATGCACGGTT GCCTGCAAGT CCGAAAACCA GGTTCCTCTC GGAGTGAACC GTACCTGGGT GAAATATGTC GAAAAAGGCA CTTTTCCCGA TACACGGCGC TACTTTACCG TTCTGCGCTG CAACCACTGC GCCGAACCTC CCTGCGTCGA TATCTGCCCG GTAGAGGCGC TGCAGAAGCG TCCGGACGGC ATTGTGGATT TCGACAGCCG CCGCTGCATC GGCTGTAAGG CCTGTGCCCA GGCATGCCCT TACAATGCGC TTTACATTGA CCCCGATACG CATACGTCGG CGAAGTGCAA CTATTGCGCG CATCGCAAGG AGGTCGGTCT CCAGCCGGCA TGCGTGGCCA TTTGTCCGCA GCAGGCAATC GTTTCGGGCG ATCTCGACGA TCCGGGCAGC AAAATCGCCG CTCTGGTTGC CGGAGAGCGG ACCGTCGTGC GCAAGCCCGA AAAAGGCACT CTGCCGAAAC TGTTCTATAT CAACGGAGAC GGCCCGTCGC TCGATCCTAT GGCGGCACCG CTGCTGGAGG AGTATCACTG GAGCGCTCAG TCAAGAGGTG TCGGGCATTT TGCCGAAAAA GGAAAAGGCG CACCGGGAAT CGAAAAGCGC ACCCATGCGG CGCCTTCGAC CGGTCCGAAA ACCCGACGGG TCTACGACAT TCCGTCGAAA GGCGCCGTCT GGGGATGGGA GGTGCCGGCC TATGTGACGG CCAAGGCAGT CTCGTCCGGA GTCTTTCTTG TATTTTTTGC GCTGCTTGTG GTTTTTCAGC TGCAACTTTC CGATTCGCTT CAGTGGGCTG CGTGGGCGGT TTCGTTTATA TTTCTCGCTC TTACGGGCGG ATTTCTTATC AAGGATCTCG ATCGTCCCGA TCGTTTTTCA TCGGTCATGC TGCGTCCGCA ATTCGGCTCA TGGCTTGTCC GCGGCGGTCT TACCATAACC GGCTACGGAG CCTTTCTCGC CTTGTGGGGC GGGGCCAGGC TTCTGCGGAT TCCCGTGCTT GAAACCGCCG CGCTCTGGGG CGGCGCCCTG TTTGCGATCG TGACGGCAAT TTACACCGCG TTTCTTTTCG GCGCCGCGAA AGGGCGCGAC TTCTGGCAGA GTCCGATGCT GCTTCTGCAT ATGTTTCTGA ACTCCCTGCT CGCCGGCGGC TCGGCCATGC TGCTGCTCGG GCTTGGCACC GGAAGCTCGT CGGAACTTCT CGGGCTGCTC CGTCAGCTTC TGACGGCAGG TTTCGGGCTG CATATGGCAA TCATGCTGAT CGAGCTCTAT GGAAAGCATC CCTCTGTAGG GGCTGAACGT GCGGCTGAAA TTATCCGTGA GGGCAGCCTG AAAAACCAGT TCTGGAGCGG AAGTTTTCTC GGAGGAAACC TGCTGCCTCT TCTCGTTACG CTGTTTTCTC CGGATCCGCT GATGCTTGCC GCTGCGTCCC TTCTCGGACT GTGCGGCGTG TTCTTCACAG AAAAAGTCTG GGTTCAGGCC CCGCAGAGAA TACCTTTAAG TTAA
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Protein sequence | MNYGFVIDAR KCIGCHACTV ACKSENQVPL GVNRTWVKYV EKGTFPDTRR YFTVLRCNHC AEPPCVDICP VEALQKRPDG IVDFDSRRCI GCKACAQACP YNALYIDPDT HTSAKCNYCA HRKEVGLQPA CVAICPQQAI VSGDLDDPGS KIAALVAGER TVVRKPEKGT LPKLFYINGD GPSLDPMAAP LLEEYHWSAQ SRGVGHFAEK GKGAPGIEKR THAAPSTGPK TRRVYDIPSK GAVWGWEVPA YVTAKAVSSG VFLVFFALLV VFQLQLSDSL QWAAWAVSFI FLALTGGFLI KDLDRPDRFS SVMLRPQFGS WLVRGGLTIT GYGAFLALWG GARLLRIPVL ETAALWGGAL FAIVTAIYTA FLFGAAKGRD FWQSPMLLLH MFLNSLLAGG SAMLLLGLGT GSSSELLGLL RQLLTAGFGL HMAIMLIELY GKHPSVGAER AAEIIREGSL KNQFWSGSFL GGNLLPLLVT LFSPDPLMLA AASLLGLCGV FFTEKVWVQA PQRIPLS
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