Gene Clim_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagClim_0034 
Symbol 
ID6355557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium limicola DSM 245 
KingdomBacteria 
Replicon accessionNC_010803 
Strand
Start bp39191 
End bp40744 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content58% 
IMG OID642667659 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_001942121 
Protein GI189345592 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1
[COG3301] Formate-dependent nitrite reductase, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTACG GTTTTGTTAT CGATGCCCGG AAGTGTATCG GATGCCATGC ATGCACGGTT 
GCCTGCAAGT CCGAAAACCA GGTTCCTCTC GGAGTGAACC GTACCTGGGT GAAATATGTC
GAAAAAGGCA CTTTTCCCGA TACACGGCGC TACTTTACCG TTCTGCGCTG CAACCACTGC
GCCGAACCTC CCTGCGTCGA TATCTGCCCG GTAGAGGCGC TGCAGAAGCG TCCGGACGGC
ATTGTGGATT TCGACAGCCG CCGCTGCATC GGCTGTAAGG CCTGTGCCCA GGCATGCCCT
TACAATGCGC TTTACATTGA CCCCGATACG CATACGTCGG CGAAGTGCAA CTATTGCGCG
CATCGCAAGG AGGTCGGTCT CCAGCCGGCA TGCGTGGCCA TTTGTCCGCA GCAGGCAATC
GTTTCGGGCG ATCTCGACGA TCCGGGCAGC AAAATCGCCG CTCTGGTTGC CGGAGAGCGG
ACCGTCGTGC GCAAGCCCGA AAAAGGCACT CTGCCGAAAC TGTTCTATAT CAACGGAGAC
GGCCCGTCGC TCGATCCTAT GGCGGCACCG CTGCTGGAGG AGTATCACTG GAGCGCTCAG
TCAAGAGGTG TCGGGCATTT TGCCGAAAAA GGAAAAGGCG CACCGGGAAT CGAAAAGCGC
ACCCATGCGG CGCCTTCGAC CGGTCCGAAA ACCCGACGGG TCTACGACAT TCCGTCGAAA
GGCGCCGTCT GGGGATGGGA GGTGCCGGCC TATGTGACGG CCAAGGCAGT CTCGTCCGGA
GTCTTTCTTG TATTTTTTGC GCTGCTTGTG GTTTTTCAGC TGCAACTTTC CGATTCGCTT
CAGTGGGCTG CGTGGGCGGT TTCGTTTATA TTTCTCGCTC TTACGGGCGG ATTTCTTATC
AAGGATCTCG ATCGTCCCGA TCGTTTTTCA TCGGTCATGC TGCGTCCGCA ATTCGGCTCA
TGGCTTGTCC GCGGCGGTCT TACCATAACC GGCTACGGAG CCTTTCTCGC CTTGTGGGGC
GGGGCCAGGC TTCTGCGGAT TCCCGTGCTT GAAACCGCCG CGCTCTGGGG CGGCGCCCTG
TTTGCGATCG TGACGGCAAT TTACACCGCG TTTCTTTTCG GCGCCGCGAA AGGGCGCGAC
TTCTGGCAGA GTCCGATGCT GCTTCTGCAT ATGTTTCTGA ACTCCCTGCT CGCCGGCGGC
TCGGCCATGC TGCTGCTCGG GCTTGGCACC GGAAGCTCGT CGGAACTTCT CGGGCTGCTC
CGTCAGCTTC TGACGGCAGG TTTCGGGCTG CATATGGCAA TCATGCTGAT CGAGCTCTAT
GGAAAGCATC CCTCTGTAGG GGCTGAACGT GCGGCTGAAA TTATCCGTGA GGGCAGCCTG
AAAAACCAGT TCTGGAGCGG AAGTTTTCTC GGAGGAAACC TGCTGCCTCT TCTCGTTACG
CTGTTTTCTC CGGATCCGCT GATGCTTGCC GCTGCGTCCC TTCTCGGACT GTGCGGCGTG
TTCTTCACAG AAAAAGTCTG GGTTCAGGCC CCGCAGAGAA TACCTTTAAG TTAA
 
Protein sequence
MNYGFVIDAR KCIGCHACTV ACKSENQVPL GVNRTWVKYV EKGTFPDTRR YFTVLRCNHC 
AEPPCVDICP VEALQKRPDG IVDFDSRRCI GCKACAQACP YNALYIDPDT HTSAKCNYCA
HRKEVGLQPA CVAICPQQAI VSGDLDDPGS KIAALVAGER TVVRKPEKGT LPKLFYINGD
GPSLDPMAAP LLEEYHWSAQ SRGVGHFAEK GKGAPGIEKR THAAPSTGPK TRRVYDIPSK
GAVWGWEVPA YVTAKAVSSG VFLVFFALLV VFQLQLSDSL QWAAWAVSFI FLALTGGFLI
KDLDRPDRFS SVMLRPQFGS WLVRGGLTIT GYGAFLALWG GARLLRIPVL ETAALWGGAL
FAIVTAIYTA FLFGAAKGRD FWQSPMLLLH MFLNSLLAGG SAMLLLGLGT GSSSELLGLL
RQLLTAGFGL HMAIMLIELY GKHPSVGAER AAEIIREGSL KNQFWSGSFL GGNLLPLLVT
LFSPDPLMLA AASLLGLCGV FFTEKVWVQA PQRIPLS