| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_0032 |
|---|
| Symbol | |
|---|
| ID | 6355555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium limicola DSM 245 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010803 |
|---|
| Strand | + |
|---|
| Start bp | 36820 |
|---|
| End bp | 38220 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642667657 |
|---|
| Product | aromatic hydrocarbon degradation membrane protein |
|---|
| Protein accession | YP_001942119 |
|---|
| Protein GI | 189345590 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2067] Long-chain fatty acid transport protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTCC TGGCTGTTCT TTCAGCGGCG TCAACCGCTT TTGCCACCAA CGGCATGAAT
CTCGAAGGGT ACGGGGCTAA ATCTCATGCT CTTGGAGGGA CAAGCACGGC CTACGATACC
GGAAATTCAG GGGTTACGAA CAACCCGGCA ACTCTTGGCC TGAGGGAGGA GGGGTCTTCG
GAAATCGGTA TCGGTATCCG CGGCCTTCAC CCGGACGTCA ATCTCGGGTT TAATGGCGTG
ACGACAACCG AATCAAAAGG GGATTCCTAT TACATGCCCT CGCTCTCTTA TATGCGCAAA
GACGGAAAGA TTACCTGGGG ATTTGCCGTT CTCGCCCAGG GAGGGATGGG AACGGAATAT
GGCGAAAACT CTTCGCTGTT CAGCTATGGC ATGCCCATGT CGAAGCAGGG AATGGTTCCG
CTGAGCGGGC AGGATATCCG TTCCGAGGTG GGAGTGGGAC GTCTGATGTT TCCCGTGGCG
TATAACCTTA CGGAAAACAC CGTCATCGGA GCATCGCTCG ATTTCCTCTG GGCAAGCATG
GATCTGCGTA TGGATATGGA CGGAGCGCAT TTCGGCGATA TGGCCATGCA GGGTATTGGC
GGCAAGGTAA GCGGATCGAT GTTCGGTACT CTCGGGGGAA TGATCGGTTC CTCAGTCCGG
GATATCGACT ACGTCCGCTA CGATTTTTCG AACGACAACG CCTTTCTCGG GGAGGCGATA
GGTTACGGAA CCGGTTTCAA GGTCGGCATT ACCCACCGGT TCGGCAAGTT CCTTACGGTG
GGAGGAAGCT ATCACTCGCA GACCCGGATT TCAGATCTCG AAACCTCCAA AGCGGTACTT
TCGTTTGCCG GGAAGGATGC GATGAATAAT TCTTTTACCC GGTCGGTGAA CGGCACTATC
AAGGTCCGCG ATTTCGAGTG GCCGGCCACC TTTGCCGCAG GAGTCGCCCT GTATCCCTCT
GAACGCTGGA TGATTACCGC CGACATCAAG CATATCGACT GGTCGTCGGT AATGGAGAAG
TTTTCGACAT CCTTTACCGC CGATAACTCT CTTTCCAACG GGCCGTTTGC AGGGCAGACG
CTTGATGTGG AGATGCTGCA GAACTGGAAG GATCAGACCG TCATTTCGGT CGGCGTTCAG
TACCGGGCAA CCGACAGGCT TGCGCTGAGG ACTGGAGCCA GCTTCGCGTC GAATCCGGTT
CCCGATATGT ATCTCAATCC CATGTTTCCG GCGATAACCG AAAACCATTA TACGGCAGGA
TTCGGTTACC GGCTTTCCGA CAGGTCTTCT GTTTCGGCGG CTCTTGCATG GGCTCCGGAA
GTAAGCGAAA CCTCTGATGA AGGACTTGAG ATCGGTCACA GCCAGCTTAA CTGGTCACTG
AACTATTCCC ACGAACTTTA G
|
|---|
| Protein sequence | MAFLAVLSAA STAFATNGMN LEGYGAKSHA LGGTSTAYDT GNSGVTNNPA TLGLREEGSS
EIGIGIRGLH PDVNLGFNGV TTTESKGDSY YMPSLSYMRK DGKITWGFAV LAQGGMGTEY
GENSSLFSYG MPMSKQGMVP LSGQDIRSEV GVGRLMFPVA YNLTENTVIG ASLDFLWASM
DLRMDMDGAH FGDMAMQGIG GKVSGSMFGT LGGMIGSSVR DIDYVRYDFS NDNAFLGEAI
GYGTGFKVGI THRFGKFLTV GGSYHSQTRI SDLETSKAVL SFAGKDAMNN SFTRSVNGTI
KVRDFEWPAT FAAGVALYPS ERWMITADIK HIDWSSVMEK FSTSFTADNS LSNGPFAGQT
LDVEMLQNWK DQTVISVGVQ YRATDRLALR TGASFASNPV PDMYLNPMFP AITENHYTAG
FGYRLSDRSS VSAALAWAPE VSETSDEGLE IGHSQLNWSL NYSHEL
|
|---|
| |