Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Clim_0022 |
Symbol | |
ID | 6354936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium limicola DSM 245 |
Kingdom | Bacteria |
Replicon accession | NC_010803 |
Strand | - |
Start bp | 26395 |
End bp | 27537 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642667646 |
Product | geranylgeranyl reductase |
Protein accession | YP_001942109 |
Protein GI | 189345580 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTACG ATGTAGCTGT GATAGGAGGA GGGCCGTCAG GCGCCGTTGC CGCTGCCATT CTGGCCCATG CCGGGCTGGA AACGGTTCTT GTCGAGCGAA ACCTCGACAA TGTAAAACCT TGCGGGGGAG CTATCCCGCT CGGTCTTATC GAGGAGTTCA ATCTTCCTGC CGAACTTGTC GAAAAGAAAC TTTCGCACAT GCGGGCCCGG TCGCCGAAGG GGCGGGTTAT AGGCATGCAT ATGCCGAACG GTTATGTGGG AATGGTGCGC CGCGAAAGGT TCGACCGCTA TCTGCGCGAT GAAGCCGGCA AATCGGGCTG CGAAGTGATG GAAGGCCTGG TAAGTTCGAT AGAGCGGCAA GGCGATGCGT TCATCATCAA AACGCTGAAC GACAAACTTC CTCCGATCGA GGCCCGATAC ATTATAGGAG CTGACGGAGC GAACTCGAAA ACCGCCGACC AGCTGCACTT CCCGCCAAAC GAACTGAAAG TGATCGCCAT GCAGCAGCGG TTCAGATACA CTCCGGCAAT TCAAGAGTTC AGCGATATCG TTGAAATCTG GTTTGACGGC GAAGTATCTC CGGATTTTTA CGGATGGATC TTTCCCAAGG CTGATCATCT GGCAATCGGT ACGGGAACGG AGGATAATAA GCATAACATC AAGGCGCTTC AGAAGCGGTT TGTTGAAAAA ATCGGCATTG CCGCCAGCCC TTATCTCGAT GAAGCCGCGA AAATTCCCAT GAAACCGAGG CGTTCGTTTA CCGGGGATCG GGCGATTCTT ATCGGGGACG CCGCCGGTCT GGTGACGCCG GCCAATGGCG AGGGAATCTT TTTTGCCATG CGCTCTGGCA AACTCGGAGC GCTTGCCATG ATCGACCACA TCAAAAACGG GAGTCCGCTC GCCCTTTACG AAAAAGAGTT CCGAAAGCTC TATGCTCCGA TTTTTTTCGG CCTGGAAGTG CTGCAGAGCG TGTATTACCG GAATGACCGG CTCAGGGAGA GCTTCGTTGC GATCTGCGCC GATGACGATG TGCAGCGCAT TACCTTCGAC TCCTATCTCT ACAAGAAGAT GGTCCCGGCG CCCTGGAGCG TGCAGATGAA AATTTTCTCG AAAAACATCT ACCACCTCCT CAAGGGAAGC TGA
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Protein sequence | MRYDVAVIGG GPSGAVAAAI LAHAGLETVL VERNLDNVKP CGGAIPLGLI EEFNLPAELV EKKLSHMRAR SPKGRVIGMH MPNGYVGMVR RERFDRYLRD EAGKSGCEVM EGLVSSIERQ GDAFIIKTLN DKLPPIEARY IIGADGANSK TADQLHFPPN ELKVIAMQQR FRYTPAIQEF SDIVEIWFDG EVSPDFYGWI FPKADHLAIG TGTEDNKHNI KALQKRFVEK IGIAASPYLD EAAKIPMKPR RSFTGDRAIL IGDAAGLVTP ANGEGIFFAM RSGKLGALAM IDHIKNGSPL ALYEKEFRKL YAPIFFGLEV LQSVYYRNDR LRESFVAICA DDDVQRITFD SYLYKKMVPA PWSVQMKIFS KNIYHLLKGS
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