Gene Clim_0015 details

Gene Information

• Locus tag: Clim_0015
• ID: 6354929
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium limicola DSM 245
• Kingdom: Bacteria
• Replicon accession: NC_010803
• Strand: -
• Start bp: 17690
• End bp: 19621
• Gene Length: 1932 bp
• Protein Length: 643 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 642667639
• Product: DNA gyrase, B subunit
• Protein accession: YP_001942102
• Protein GI: 189345573
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit
• TIGRFAM ID: [TIGR01059] DNA gyrase, B subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.00473367
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGATA CCGGTACACA GACACCTTCT TCCTACTTAG CAACCAATAT CCAGATTCTG 
GACGGCATTG AGCATGTTCG CATGCGCCCT GCAATGTATA TCGGCGATAT TCATACCAGA 
GGACTGCACC ATCTTGTTTA TGAGATTGTC GATAACTCCA TCGACGAGAC CCTCGGTGGG 
TATAACGATT ACATTTTTGT TGGCCTGAAT CCCGACGGCT CGGTTACGGT TATTGACCGC 
GGACGTGGTA TTCCGGTGGA CATCCACCCC GAAAAACAGA AATCCGCACT TGAACTTGTC 
ATGACCGTTA TCGGTGCAGG AGGCAAATTC GACAAGGGTG CCTACAAGGT TTCAGGCGGT 
CTGCACGGTG TCGGTGCATC TGTCGTCAAT GCCCTTTCCG AGTGGTGCGA AGTTGAAGTC 
TATCGCGACG GTAAGGCTTA CTTCCAGCGC TACGAGCGCG GCGTACCTCA GGGTGATGTC 
AAAGAAATAG GCCCTTCGGA CCTGCGCGGA ACGAAAACCA CATTCAAACC CGACCACGAA 
ATTTTCAAGA CAACCGAGTT CCGCAGGGAT ATCATTATCG ATCGCATGCG CGAACTGGCA 
TTCCTGAATA AAACGCTCCG CATCACCGTC CAGGATTCCG ACGGCAACGA AGAGGTATTC 
CATTATGAGG GCGGACTTAA CGAGTTCGTA CAGTTTACCG ATCAGAACCG TATAAAACTT 
CTCAAGGAAC CGGTCTATAT ATACGGAGAA CGCGACTCCA CCATTGTCGA ACTGGCACTG 
CAGTACAACG ACTCATATCA GGAGAACGTT TTCAGCTATG TCAACAATAT CAACACCCAT 
GAAGGCGGCA CCCATGTTAC CGGGTTCCGA AAAGCCCTCA CCCGTACACT GAACGCATAC 
GCGCAGAAAA ACGACCTTCT GAAAAACCTG AAGCTCTCCC TGACAGGAGA CGATTTCAAG 
GAGGGACTGA CAGCGGTAAT TTCGGTCAAG GTTGCCGAAC CGCAGTTCGA AGGGCAGACC 
AAAACAAAGC TCGGCAACTC CGAAACGCAG AGCATTGTCG AGAGCATTGT CAACGAGCAG 
CTCGCGGAGT TCCTTGAAAG CAACCCGAAT GTCCTTAAAC TGATCATCGA AAAGGTAAAG 
GGCGCCGCGA TGTCGAGAGA GGCGGCACGA AAAGCCAAGG AACTGACCCG GAGAAAATCG 
GTACTTGAAA GTTCGGGCCT GCCCGGCAAG CTTGCAGACT GCTCGATCAA CGATCCGGAA 
CATTGCGAAC TGTACATTGT CGAAGGCGAT TCTGCAGGAG GCAGTGCGAA ACAGGGAAGG 
GATCGCAGTT TTCAGGCCAT CCTGCCGCTA AAAGGCAAAA TTCTCAATGT CGAAAAAGCC 
CGCCTGCACA AGATGCTGGA AAACGAGGAG ATCAAAACCA TTATCCTCGC GCTTGGTACG 
AGTTTCGGCG AGGAGGAGTT CTCTCCGGAA AAGCTCAGAT ATGGCAAGAT CATCATCATG 
ACCGATGCCG ATGTTGACGG GGCCCATATC AGAACCCTGC TTTTAACCTT TTTCTTCCGG 
TACATGCGCT CTCTCATTGA AGCCGGCAAG GTGTTCATAG CCCAGCCTCC GCTCTACCTT 
GTCAAATCCG GCAAGGATCA GCAGTACGCC TGGGATGACG ACGAACGAAA TGCCGTTATC 
GAATCGCTCA GGAAAATGCA GAAGGGAAAG GCCAATGTTC ACATTCAGCG GTACAAAGGC 
CTTGGTGAGA TGAACCCGGA ACAGCTCTGG AGCACTACCA TGGATCCGGC TCATCGCTCA 
CTGTTACAGG TAAGCGTAGA AAATGCCATG GAAGCCGACA AGGTATTTTC TACGCTTATG 
GGGGACAAGG TTGAACCCCG AAGGGATTTC ATTGAAAAAA ATGCCCGTTA TGTCCGAAGA 
TTAGACGTCT GA 

 

Protein sequence

MPDTGTQTPS SYLATNIQIL DGIEHVRMRP AMYIGDIHTR GLHHLVYEIV DNSIDETLGG 
YNDYIFVGLN PDGSVTVIDR GRGIPVDIHP EKQKSALELV MTVIGAGGKF DKGAYKVSGG 
LHGVGASVVN ALSEWCEVEV YRDGKAYFQR YERGVPQGDV KEIGPSDLRG TKTTFKPDHE 
IFKTTEFRRD IIIDRMRELA FLNKTLRITV QDSDGNEEVF HYEGGLNEFV QFTDQNRIKL 
LKEPVYIYGE RDSTIVELAL QYNDSYQENV FSYVNNINTH EGGTHVTGFR KALTRTLNAY 
AQKNDLLKNL KLSLTGDDFK EGLTAVISVK VAEPQFEGQT KTKLGNSETQ SIVESIVNEQ 
LAEFLESNPN VLKLIIEKVK GAAMSREAAR KAKELTRRKS VLESSGLPGK LADCSINDPE 
HCELYIVEGD SAGGSAKQGR DRSFQAILPL KGKILNVEKA RLHKMLENEE IKTIILALGT 
SFGEEEFSPE KLRYGKIIIM TDADVDGAHI RTLLLTFFFR YMRSLIEAGK VFIAQPPLYL 
VKSGKDQQYA WDDDERNAVI ESLRKMQKGK ANVHIQRYKG LGEMNPEQLW STTMDPAHRS 
LLQVSVENAM EADKVFSTLM GDKVEPRRDF IEKNARYVRR LDV