| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1769 |
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| Symbol | |
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| ID | 6332043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1828494 |
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| End bp | 1830032 |
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| Gene Length | 1539 bp |
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| Protein Length | 512 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642658042 |
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| Product | protein-export membrane protein SecD |
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| Protein accession | YP_001931918 |
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| Protein GI | 188997667 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0342] Preprotein translocase subunit SecD |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGTTG ATGTAAAAAT AAAGTTAATA ATTGTTTTTC TTTTGCTTGT TGGGTCTATT
TATCTAATGA TGACAAAACA GCCAAAGCTT GGCTTGGATA TCCAAGGTGG TGTAAGTATC
ACATTAAAAG TTGACATTGA TAAAGTAATC AACGACCAAT ACGCACATCT TGGAAAGGAC
ATAGAAAAGA AATTTAAAGA AAATGGCATA GAGCTTTTAA ATTACAAAAT AGAAAATCAA
TCTCTAACGT TGGTTCTTTT AGACCCAACA AAGATAGACA AAGCAAAAGA GGTTCTTAAA
AAGGAGTTTC CGCAGGTAGT TGTTGAAGAT AAAGACGGCA ATCTATTAGT TAGATTTACA
GATTGGGAGT TAAACAGAAT AAAAACTCAA ACTATGAAAC AAGCAGTAGA GACTTTAAGA
AACAGAATTG ACCAATTTGG AACGCTTTCT GCAAACATCA CTCAAAAAGG CAAAGATAGG
GTATTGGTTG AAATACCGGG TGTTATAGAC TTAAACAGAG CCAAATCTAT CATTGGAAAA
ACTGCACAAC TTGAACTAAA AGAAGTTGTA AATTCTGCTT TAAGTAAAGA AGAGTTATTA
AAAGATTATC CAAATGGCTT GCCTGATGAC CTTGAAATCT TGGAAGGTCA AGAAGAAGTA
GTAAACGGTC AGCCTGTAAA AGAATGGTTT TTAGTTAAAA AAACTCCTGT TATAACGGGA
GCTATGCTTA AAGATGCAAG GGTTTCAACA GACCAAGCAG GAAATCCGGC GGTTAATTTT
GAGCTTACAT CAGAAGGAGC AGAAATATTT GGTGAAGCTA CAAGTAAAAT GATTGGTAAA
AGGCTTGCAA TAGTTCTTGA TGGAAAGGTT ATGTCTGCAC CTGTGATTAG GTCAAGAATA
ACATCATCAG GACAGATAAC GGGAAGATTT ACAACAGAAG AGGCTAATGA TTTAGCGGTA
GTTTTAAGAG CCGGAGCATT ACCCGCACCG GTAGAAATAA TAGAAGAAAC AGTAATCGGT
CCAACCCTTG GAAAAGAATC TATCGATAAA ACTCTAACAG CAGGAATTGT ATCTTTTGTT
CTCGTTGGAC TTTTTATGAT ATTCAGATAT GTAGTATCAG GATTTATTGC AGTAGTTGCA
CTTCTTTTCA ACTTAATGCT GCTTTGGGTG ACAATGCTTT TATTTGACAT TACTTTAACA
CTTCCGGGTA TTGCAGGTAT CATATTAAAC ATAGGTATGG GTGTTGATGG AAACGTTGTT
ATCTTTGAAA GAATAAAAGA AGAGCTTAAA AATGGTAAAA CACTAAGAGT TGCCATAGAA
GAAGGATTTA AAAGAGGTTT TAATGCAGTT TTTGACTCAC ACATAACAGT AATAATTGCA
GCACTTGCTT TACTTGAGTT TGGAAATGCA CCACTTAAAG GCTTTGCAGC AACACTATCT
ATTGGTACAT TCATAAACTT ATTTACTGCT GTATTTTTAA CAAAAATGCT GCTTGATTTA
GTCCTCGGCG GCAAAAAATA CTTTAAATAC GCTGTTTAG
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| Protein sequence | MKVDVKIKLI IVFLLLVGSI YLMMTKQPKL GLDIQGGVSI TLKVDIDKVI NDQYAHLGKD
IEKKFKENGI ELLNYKIENQ SLTLVLLDPT KIDKAKEVLK KEFPQVVVED KDGNLLVRFT
DWELNRIKTQ TMKQAVETLR NRIDQFGTLS ANITQKGKDR VLVEIPGVID LNRAKSIIGK
TAQLELKEVV NSALSKEELL KDYPNGLPDD LEILEGQEEV VNGQPVKEWF LVKKTPVITG
AMLKDARVST DQAGNPAVNF ELTSEGAEIF GEATSKMIGK RLAIVLDGKV MSAPVIRSRI
TSSGQITGRF TTEEANDLAV VLRAGALPAP VEIIEETVIG PTLGKESIDK TLTAGIVSFV
LVGLFMIFRY VVSGFIAVVA LLFNLMLLWV TMLLFDITLT LPGIAGIILN IGMGVDGNVV
IFERIKEELK NGKTLRVAIE EGFKRGFNAV FDSHITVIIA ALALLEFGNA PLKGFAATLS
IGTFINLFTA VFLTKMLLDL VLGGKKYFKY AV
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