| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1761 |
|---|
| Symbol | |
|---|
| ID | 6332005 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1822480 |
|---|
| End bp | 1823721 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642658034 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_001931910 |
|---|
| Protein GI | 188997659 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II |
|---|
| TIGRFAM ID | [TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGATT TTAAATTTAA CACGATAGAT GAAGCCATAG AAGATATTTT AAACGGAAAA
ATGGTTATTG TTGTAGATGA CCCAGACAGG GAAAATGAAG GAGACCTTGT TTGTGCAGCA
GAAAAAGTAA CGCCAGAAAT CATAAATTTT ATGGCAAAAG AAGGTAGAGG ATTAATCTGC
TTATCTATGC TGCCAGAAAG ACTCAAAGAG CTTGATATCC AACTAATGAC AACCAACAAC
ACAGACCCAA AGGGAACTGC TTTTTGTGTA TCTATTGATG CACATCCAAA ATATGGAATA
ACAACAGGTA TATCTGCTTA TGAAAGAGCA ACTACGGTAA AATTAGCAGT TAGCCCGGAA
GCTAAACCAC AGGATTTTGT AAGACCGGGA CACGTATTCC CGTTAATGGC TAAAAAAGGT
GGGGTATTAG AAAGAACGGG ACACACAGAA GCTTCTGTTG ACCTTGCAAG ACTTGCAGGT
TTATATCCTG CTGGCGTTAT ATGTGAAATT ATGAAAGAAG ATGGTACAAT GGCAAGACTT
CCTGATTTGA TGGAGTTTGC AAAAAAACAC AATCTTAAAA TCATTACAAT TGCAGACTTA
GTTAAATACA GACTGAAAAA AGAAAAGCTT GTTTCAAGAG AAGCAGAGGC ATTCTTACCT
ACAAAGTATG GTGTATTTAA GATATATGGT TACAAAAGTT TAGTTGATAA TACTGAGCAT
GTAGCACTTG TGATGGGAGA AATAAGAGAA GATGAGTCTG TTCTTGTAAG AGTTCATTCA
GAATGTTTGA CAGGTGATAT ATTTGGTTCT TTAAGATGTG ATTGTCAAAA TCAATTACAC
TTAGCACTTA AAAAGATAGC TGAAGAAGGT AAAGGTGTTT TAGTATACAT GAGAGGACAT
GAAGGAAGAG GAATTGGAAT TATTAATAAA TTAAAAGCAT ACAGGCTTCA AGATGAAGGT
TATGATACAG TTGAAGCAAA TCATAAACTT GGATTTAATG CAGATTTAAG AGATTTTGGA
ACAGGTGCAC AAATTCTATT AGACCTTGGA GTTAAAAAAA TGAGACTTAT GACAAATAAT
CCAAGAAAGA TAGTAGCTTT AGAAGGCTTT GGACTTGAAA TCGTTGAAAG GGTACCTATT
GTTACACAAA CAAATCCACA TAATGAAAAG TATATAAAAG CTAAAAAAGA TAAACTCGGA
CATATGATAG AAGGATTGGA AGACTTAAAA TGCGATATTT AA
|
|---|
| Protein sequence | MTDFKFNTID EAIEDILNGK MVIVVDDPDR ENEGDLVCAA EKVTPEIINF MAKEGRGLIC
LSMLPERLKE LDIQLMTTNN TDPKGTAFCV SIDAHPKYGI TTGISAYERA TTVKLAVSPE
AKPQDFVRPG HVFPLMAKKG GVLERTGHTE ASVDLARLAG LYPAGVICEI MKEDGTMARL
PDLMEFAKKH NLKIITIADL VKYRLKKEKL VSREAEAFLP TKYGVFKIYG YKSLVDNTEH
VALVMGEIRE DESVLVRVHS ECLTGDIFGS LRCDCQNQLH LALKKIAEEG KGVLVYMRGH
EGRGIGIINK LKAYRLQDEG YDTVEANHKL GFNADLRDFG TGAQILLDLG VKKMRLMTNN
PRKIVALEGF GLEIVERVPI VTQTNPHNEK YIKAKKDKLG HMIEGLEDLK CDI
|
|---|
| |