| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1748 |
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| Symbol | |
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| ID | 6332692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1807848 |
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| End bp | 1809014 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642658023 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001931899 |
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| Protein GI | 188997648 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 51 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA GCGGACCTGT AAAGTTTATA CTCTTTTTTG TTTTACCGAT CGCTATCTTC
ATTTTATGGC TTGGAGGATT TTTATCTCAC AGGGTTGAGC CGGGAGAAAA GAAAGAGGTT
AAAGTTGTCA GTGGACTACC TGTTTTAACA GTTGAAGAAA AACAAGCCCC TAATTGTTAC
AAAGCTGACG GTATGGTTTC GGCTGATAAC AATGCAAAAG TGGCTACAAA ATGGATGGGT
CAAATATTAA AAATCTATGT TAAAGAAGGC GACTATGTAA AAGCCGGACA GGTTTTAGCT
ATTCTTGATG ATTCTGAGAT AAAACAGCAA AAAAATGAAG CTTTAGCCGG ACTGGATGAG
CTTTCTAAGG CAAGAGAAGA AGCTTTAGCA GCAAGAAAAG CAGCTCTTGA AAACTATGAA
TTTGCAAAGA GGACTTATGA AAGATTTAAA AATCTTTATC AAGAAAATGC TATCTCAAAA
CAACAACTTG AAGAAATAGA AACAAAAATG ATTGCTGCAA AATCTATGGT TGACCAAGTA
GATGCTAAAT TAGGTCAGTT AAAAGCAAAA GAATCACAAG TTAAAGCTAA ATTAGCTCAA
GTTAATGTTA TGCAAGGATA TACAGTTATT AAAGCACCTT TTGATGGTTA TGTTTTAAAG
AAGATGAATG ATGAAGGAGA TATGGTAGCT CCCGGCATGC CGATTTTCAT CATTGGAGAG
AAAAAATTAC AGTTTATAGC AAATCTTGAT GAATCATTGC TTGATAAAGT AAAAGAAGGT
GATGAGCTTG ATATTGATTT AAATGGTAAA GTTGTAAAAG GAAAAGTTAT TGAGAAAAAC
TCAAACATAG ACCCAATGAA CAGAACCTTT AAAGTTAAAT TAGACATTCC TTTCTCAGAA
AATATCACAA CAGGTATGTA CGGAAAATTA TTAATACCTA TAGATACAAA GCCAAAAATA
CTTATTCCTA AAACAGCCGT GTTTAAGTGG GGTCAGCTAA ATGCAGTTTA TACAGTTGAT
AAAGATAATA TAATCAGACT AACCTACGTT AAACTTGGAG AAGACTATGG AGAATACGTA
GAAGTTCTTT CTGGTTTAAA ACCTAAAGAC AGAATTATCC AATCTAACAT AGAAAAAGCT
TGTGATGGAT GTAGGTTAGG AGGATAA
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| Protein sequence | MKMSGPVKFI LFFVLPIAIF ILWLGGFLSH RVEPGEKKEV KVVSGLPVLT VEEKQAPNCY
KADGMVSADN NAKVATKWMG QILKIYVKEG DYVKAGQVLA ILDDSEIKQQ KNEALAGLDE
LSKAREEALA ARKAALENYE FAKRTYERFK NLYQENAISK QQLEEIETKM IAAKSMVDQV
DAKLGQLKAK ESQVKAKLAQ VNVMQGYTVI KAPFDGYVLK KMNDEGDMVA PGMPIFIIGE
KKLQFIANLD ESLLDKVKEG DELDIDLNGK VVKGKVIEKN SNIDPMNRTF KVKLDIPFSE
NITTGMYGKL LIPIDTKPKI LIPKTAVFKW GQLNAVYTVD KDNIIRLTYV KLGEDYGEYV
EVLSGLKPKD RIIQSNIEKA CDGCRLGG
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