| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1648 |
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| Symbol | |
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| ID | 6332542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1704869 |
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| End bp | 1705510 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642657923 |
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| Product | RNA polymerase, sigma 28 subunit, FliA/WhiG family |
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| Protein accession | YP_001931800 |
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| Protein GI | 188997549 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0000000334042 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTTAA GTAAAGAGCA AAAAAAGCAA ATAGTTGAAG AATATATTGG CTTAGTTAAA
AAAGTTGCTT CAAAAATATT TTATAGATTG CCGGATTGTG AGATAGAATT TGATGATTTG
GTGCAAACCG GCATTGTAGG GCTATTAAAA GCTCTTGAAA ATTACAATGA AGATAAAGGT
AAATTTTCAA CCTATGCATA CATCAGAATC AGAGGAGAAA TTCTTGATTT TCTAAGACAG
CAAGATATTA TGCCAAAAAC GGAAAAAGAT AAAATCACCA TAGAGTATGC AGATAAACTT
GGAGATGAGC TTCCTATTTC TAAAAATGCA ATAATGCTGA GTTTAGATAA AATTATTTCT
GAAGATGGAG AAGAATTTTC TTTTATAGAT TTATTTGCAT CTAAATCTAA AACACCTGAA
GAAGAGTATG CACAAAAAGA ATTATTAGAA AAAATCTCAG AGGCTATTGA TAAATACTTA
GATGATATTG AAAAGAAGAT AATTCAATAT TTATACTTTG AAGAAAAAGA TCCGAAAGAG
ATATCGGAAA TTATGAATAT AAGCCTTGGG AGGATTTCAC AATTAAAATC AAGAGCAGTG
GAAAAATTAA AAAAAATTCT GTATGATAAT ATAGAGGGTT AA
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| Protein sequence | MNLSKEQKKQ IVEEYIGLVK KVASKIFYRL PDCEIEFDDL VQTGIVGLLK ALENYNEDKG
KFSTYAYIRI RGEILDFLRQ QDIMPKTEKD KITIEYADKL GDELPISKNA IMLSLDKIIS
EDGEEFSFID LFASKSKTPE EEYAQKELLE KISEAIDKYL DDIEKKIIQY LYFEEKDPKE
ISEIMNISLG RISQLKSRAV EKLKKILYDN IEG
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