Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1647 |
Symbol | |
ID | 6332530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1703480 |
End bp | 1704865 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 24% |
IMG OID | 642657922 |
Product | hypothetical protein |
Protein accession | YP_001931799 |
Protein GI | 188997548 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000000185141 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAATT TAATGCAACC ATATATAGAA GGCTTAGGAA TAATAAGAGG CAGCAGCAAT AAAAAGAAAA AGCAAAATCT AGAAAAAAAT ATTTTCGATG ATATTATTTC TAAATCTATA GATAAAAAAG AAGCAGTTAA AAAGAATAGA GACGTAAAAA ACAAAGATAA AGACTTAGAA ACAGTCTCAA GTTTAAATAT AGCCTTAAGT CATAATGCAG TTAATAATAA TGTAGAAAAT TTAAAGAATG TTAAAAGTGA AGAAAATAAA ATTAAAACCG GCTTAGAAGT TAATAGTTCC ACCATTAATA AAAATTCTTA TAAAAATCAA CTAACTATCA CTAAATTCAT AGAGTCTATA GTAAATGTAG AAAACTCAAG AAAATTTAAA AACGATAAGG CTTTAGACAA ATCCAGCTTA GAAATAAGTA ATACTCTAAC TGTTAATGAA AATTTAAACA AGCAAATAAA TCAAATTAAA GACTTTAAAT TGGCTATGGG AAGCTTAGAA ATCAGACAAC AGAAGATAGA AAGCATTATA AAATCTAATC AATTTCAAGA TAAAATAAGT TTGCAAATGA AAAATACTAA ACAAGGCATT AAAAGGGAAA ATTTAAATGT TATTGAAGAA GAAAACTTAC CGAACTTAAA AAGTCCTTTA AAAAAATTAA ATAAGATGAA TAATCTTGCA ATAGATAAAA CTAACATACC TTTAGATGAT AAAAATAAAT CAAATAGTGA CGTAAATAAT AAATTACAAA AAGATGTCAT TTATAATCTT CTAAAGAAAA AAGAAGAATT TGACAAACTT ACATCAAAAA TTGAAGATAA AAAAACTGGA GAGTTAAAAG AGTTTAATAT TCTTAAGTCA AATAAAGAGC CTGAACTTGA AATATCTATT AATAATTTTA ATGAAAACTT GAGAGCGGAA GGCTTGCAAA ATTCCAATGA AGTTAATTTT TATACTAACA AAAATAATGA TGGAAACAAT CTGGTTGCTA CAAATTATAA TGATAACCTA CCTCAATCAG TAAATATCAA CATTTCAAAT TCTAACGATA GCAATTCAAA CTATCAAAAC AATCAAAACG ATAACAATTT TAATAAAAAT ATGAATGGGC AAAATCAAAA TAACAACTCC TTTGTATTCT CATACAATCA GACAAATATA TCTGCTAATT TAGCATCAAA TGCTTTAAAC CTTGTTATTA ACACAAAAGA CGTTATTTTA GATGATATTA CAATTCTTCA AATACAACAA ATATTGAAAG ATAATGGATT TAAACACCAT AATATAACAA TCAAAGATAA AGAAAAAGTT TTAAAACTAT ACGAATATAA AGCAATTAAT AATTCTAACA CTTCCGGGAT AAACCTTGCG GTATGA
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Protein sequence | MKNLMQPYIE GLGIIRGSSN KKKKQNLEKN IFDDIISKSI DKKEAVKKNR DVKNKDKDLE TVSSLNIALS HNAVNNNVEN LKNVKSEENK IKTGLEVNSS TINKNSYKNQ LTITKFIESI VNVENSRKFK NDKALDKSSL EISNTLTVNE NLNKQINQIK DFKLAMGSLE IRQQKIESII KSNQFQDKIS LQMKNTKQGI KRENLNVIEE ENLPNLKSPL KKLNKMNNLA IDKTNIPLDD KNKSNSDVNN KLQKDVIYNL LKKKEEFDKL TSKIEDKKTG ELKEFNILKS NKEPELEISI NNFNENLRAE GLQNSNEVNF YTNKNNDGNN LVATNYNDNL PQSVNINISN SNDSNSNYQN NQNDNNFNKN MNGQNQNNNS FVFSYNQTNI SANLASNALN LVINTKDVIL DDITILQIQQ ILKDNGFKHH NITIKDKEKV LKLYEYKAIN NSNTSGINLA V
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