| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1632 |
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| Symbol | |
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| ID | 6332362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1691527 |
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| End bp | 1692300 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642657907 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001931784 |
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| Protein GI | 188997533 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTACTAA TAACACCCGA CCAAGCTACA ACAGTTGCAC TAATATTTTC AAGAATAATT
GCGTTTTTTA TGGCTTTTCC GCTTATTTCA TCTCCAATAA TTCCTCACAA CGTAAAAGTT
TTATTAGTCG TTTCTTTTGC TTACTTTACA ATGCTAAATT TCAATATAAA GTTAGAAATA
AAAGAATACG ATTTGTTAGT ATTCCTTACA CTAATTCTAA AAGAAGTTTT TATTGGTTTT
TCCTTAGGAA TAATAGTTAA TATATTTATT GGAGCTTTTT CTTACGCTGC AGAAATAATT
AGCTATCTCA TGGGGCTAAC AGTTTTAAAT ATGTTTAACC CAGCTTTTGG TCAAACTTCT
GTGTTATCCG GATATTTTCT TTTTTTATTT TATTTCTTGT TTTTTATATC CGGAGCTTAT
CAAATTTTTA TAGGAGCTTT GTTTAAAAGC TTTGAAGTGA TTCCTCTTTC TTCTTTTAAT
ATAAATAACG GAGTGTTTGA ATTTATCATC AAAAAAAGTT CAGATATTTT TTTACTGTCT
TTTCAGATGG CATTCCCGTT TATTTTAGTC TTACTTGTAT TTAATATAGT TTTGGCATTG
ATAAATAGAT TGATCCCTCA AATAAACGTT TTTATGGTTG GACTTCCGGC ACAGATTTTT
ATTGGATTTG TCATACTCAT ATTTGCAAGT TCATTAATAA TAAGCGTAGG TCTTAACTTT
ATTGATAAAA TGACAAATTA TTATTTAACT TTAATGGAAA TTTTTAGCAG GTAA
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| Protein sequence | MVLITPDQAT TVALIFSRII AFFMAFPLIS SPIIPHNVKV LLVVSFAYFT MLNFNIKLEI
KEYDLLVFLT LILKEVFIGF SLGIIVNIFI GAFSYAAEII SYLMGLTVLN MFNPAFGQTS
VLSGYFLFLF YFLFFISGAY QIFIGALFKS FEVIPLSSFN INNGVFEFII KKSSDIFLLS
FQMAFPFILV LLVFNIVLAL INRLIPQINV FMVGLPAQIF IGFVILIFAS SLIISVGLNF
IDKMTNYYLT LMEIFSR
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