Gene SYO3AOP1_1606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1606 
Symbol 
ID6332187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1661638 
End bp1663728 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content34% 
IMG OID642657881 
ProductTonB-dependent receptor 
Protein accessionYP_001931758 
Protein GI188997507 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.72297e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGC TTGCATCAAT GGTTTTATTA TCTACTTACG TGATGTTAAG TTATTCACAT 
GCAGTAGAAG GCATTAGAAT TGAAAAAGTT ACAGTTGAAG AGAAAAAAGC TGAGGAAGAA
GTAAGCACAA AAAAAGAACT TACACAAGAA GAGGCTAAAG TTACAAGACA GATTGACCTT
GGAGAGATTT TATCAGAGTT TTATCCAGAA GTTTGGTACA TGAGAAAGGC AGGAATTGCA
AATGATTTAT ACATTAGAGG ATTTGCAAAA GATAACATTA ATGTATTGAT CGATGGTTCT
AAAATCTATG GTGCATGTCC AAACAGAATG GACCCCCCTT CTTTTCACGT TTCATCTCCT
CAGATTGAGA ATATAACCAT AAAAGAAGGT CCATTTGATG TTGAAAATGC AGGTTCTCTT
GCTGCGGTTG TAAACGTAAA AACAAAAGAC CCTAAGGAAG GAATCGGGGG AGAGATAGGG
GGAACCTATG GAAGTTGGAG CTATAGGACT GGCTACGTAT GGGGAAATGT TGGAAATAAG
TTTATCAAGG TTTTAGTTGG TGCATCAAAT CAATACTCTA AGCCTTATGA AAGCGGAGAG
GGTAAAAAGG TTACAGAGTA TGCAGTCTAT TCTACACCAG CTGGACCAAC AGCAGGAAAG
TATAAATCCC AATACATTAA CGACAAAGCA TTTAATATAG ACAGAGTATG GACAAAGTTA
TTGATTACTC CAAACGATAA TGCAGAGATT AAACTTTCTT ATGCTTTTGA AAATGCAAGA
AATGTATTAT ATCCGGCTTT AAAAATGGAT GCTTTGTATG ACAGAACAAA CAGATTTAAC
ACAGATTTTA AACTTAAAGA TATTGGTCTT AATTTTAGCA TCTACTATAA TGAAGTAAAA
CATGATATGA GAGATTCTTT TAGAACTACA GCAGGAAATT ATCCATATTC TATGAAAACT
TATGCTGAGT CAAAAATGTT TGGAACTAAA CTTTCAAAAG ATTTAAATCT TTTTGGACTT
AACATGACAG TTGGGATTGA TACATATTTA AGAAATTGGA AAGCGGATAA TATTCAAAAT
GCATTTACAT CGACACCTAA CTACAACGAT GGTATGATAC CGGATGTTGA TATTAAAGAC
ATTGGATTGT TTGTAAAAAG CAGTAAAGAT ATAGAAAAAT GGACTATCTC CGGCGGCTTA
AGATACGATT ATACGTATTC AAAAGCAGAC CCAAATTCTA TGACAGCTAA TACTAACAGA
GATTTATTTA TTAAAAAAAA TGGCTACAAA TTCTCTAACA CAGATAACTA CGTATCAGGT
TATGCTATTG CAAAATACAA TATCAATAAA AAAGATAATG TATACGTAGG ATTTGGTAGC
ACTGTAAGAG TTCCAGACCC AGAGGAGAGA TTTATATCTT TAAGCGGTAT GGCACCATGG
TATGGTAATC CAGATTTAAA GCCAACAAGA AATAATGAAA TAGATGCAGG GTTTGAAGCA
TTTCCAATGA ATAATGTTGG AATTAAAGGC AATATCTTTT ATAGCATGCT GCAGGATTAT
ATTTATTTAC GTCAGTATTC AGATAGTGGC AAAACTTACA TAACCTATGA AAACATAAAC
GCTGCGATTT ATGGTGGAGA TATTAACGGA TTTGTTGCTA TAAACGACAA AATCTCAACA
GAGCTTGGGC TTGCTTATCA AATTGGTAAA AAAACAGACA AAAAAGGATT ATACACAGAC
AGCGATTTAG CAGAAATTCC ACCATTAAAA GCAAGATTGG CTGTTAAATA CGATGATAGA
ACTTTCTACG GACTAATAGA AGGTATATAC TCTGCAAAAC AATCAAAAGT TGACTCAGAT
TTAAAAGAGC AAGAAACCGG CAGCTGGTTT ATAGTAAACG TTAAAGCAGG ATATACATAT
GCAAATAGAC TATTTGTTGG TGTTGGTGTT GATAACGTAT TTGATAAATT CTACTATAAC
TATCTATCTT ATGTAAGAGA CCCATTTAGA GGAATTTCTT TATCAGGAAA TCCTGTCAAA
ATCCCAGAAC CCGGAAGATT TATTTACGCA AACGTTTCTT ACAGATTTTA A
 
Protein sequence
MKKLASMVLL STYVMLSYSH AVEGIRIEKV TVEEKKAEEE VSTKKELTQE EAKVTRQIDL 
GEILSEFYPE VWYMRKAGIA NDLYIRGFAK DNINVLIDGS KIYGACPNRM DPPSFHVSSP
QIENITIKEG PFDVENAGSL AAVVNVKTKD PKEGIGGEIG GTYGSWSYRT GYVWGNVGNK
FIKVLVGASN QYSKPYESGE GKKVTEYAVY STPAGPTAGK YKSQYINDKA FNIDRVWTKL
LITPNDNAEI KLSYAFENAR NVLYPALKMD ALYDRTNRFN TDFKLKDIGL NFSIYYNEVK
HDMRDSFRTT AGNYPYSMKT YAESKMFGTK LSKDLNLFGL NMTVGIDTYL RNWKADNIQN
AFTSTPNYND GMIPDVDIKD IGLFVKSSKD IEKWTISGGL RYDYTYSKAD PNSMTANTNR
DLFIKKNGYK FSNTDNYVSG YAIAKYNINK KDNVYVGFGS TVRVPDPEER FISLSGMAPW
YGNPDLKPTR NNEIDAGFEA FPMNNVGIKG NIFYSMLQDY IYLRQYSDSG KTYITYENIN
AAIYGGDING FVAINDKIST ELGLAYQIGK KTDKKGLYTD SDLAEIPPLK ARLAVKYDDR
TFYGLIEGIY SAKQSKVDSD LKEQETGSWF IVNVKAGYTY ANRLFVGVGV DNVFDKFYYN
YLSYVRDPFR GISLSGNPVK IPEPGRFIYA NVSYRF