| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1605 |
|---|
| Symbol | |
|---|
| ID | 6332186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | - |
|---|
| Start bp | 1660380 |
|---|
| End bp | 1661090 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 642657880 |
|---|
| Product | succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| Protein accession | YP_001931757 |
|---|
| Protein GI | 188997506 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000000000156104 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTATTA AGATAAACAG AAATGGTAAT TATCAGACTT ATGAGATAAA TAACATTGAA
GATAGAACTA CTATTTTAGA AGTTTTGGAG CAAATTAAAA ATTATCAGGA TTCGAGTTTA
TCATACAGAG CCCAATGTAG AGCTTCCATT TGCGGAACTT GCGCAGTAAA AGTTAATAAT
CAAACAGTCT TAGCATGTAA AACAAAAGTA AAGGATTTAG CGGTTAATGA TGAAATAGTG
ATAGAGCCTT TATCCAACAT GCCTGTTATA AAAGATTTGG TTGTGGACCA TGATGAATTT
TTAAATAAAT TAAAAAAAGC CAAGGCATGG TTTATTCCAA AAGAACCTTT TGAAAAGGTT
TATCCTGAGG ATTTGGCAAC GTATGATAGA GAAACAGATT GTATTTTGTG CGGAATTTGT
TATAGTGTTT GTCCGGCTTT TGCAAATGAT AAAGATTTTG GCGGTCCTAT AAACTTTGTT
AAAATTTTTA GATTTTGGAA AGATAAAAAC GATGCGTTAA ATGATGGAAG AATACAAATA
GCCGCTGAAA ATAATATAAC TTCATGCATA CATTGTAAAT ACTGCACTTT TTCATGTCCA
AAACAAATTC CAGTAGAAGG AGACATCTTA CAATTAGAAT TCTATGGAAA GCAAAAAGGT
ATAATCAAAA AGCAAGAAGA CTTTGGATTT AACTTTGGAT TTGGATTTTA G
|
|---|
| Protein sequence | MIIKINRNGN YQTYEINNIE DRTTILEVLE QIKNYQDSSL SYRAQCRASI CGTCAVKVNN
QTVLACKTKV KDLAVNDEIV IEPLSNMPVI KDLVVDHDEF LNKLKKAKAW FIPKEPFEKV
YPEDLATYDR ETDCILCGIC YSVCPAFAND KDFGGPINFV KIFRFWKDKN DALNDGRIQI
AAENNITSCI HCKYCTFSCP KQIPVEGDIL QLEFYGKQKG IIKKQEDFGF NFGFGF
|
|---|
| |