| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1577 |
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| Symbol | |
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| ID | 6331588 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1630957 |
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| End bp | 1632162 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642657852 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_001931729 |
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| Protein GI | 188997478 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.340093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCTTT ATCTGAAGAT AGCACTAAGA TATTTGTTTT CTACAAAATC TAAACTTTTA
TCTTTTATGT CTATTATTTC TATCATCGGA ATAACTCTTG GAGTTGCTGC TTTAATCATA
ACTATGGCTG TGATGGGTGG TTTTATGTAT GGAATAAAGT CTAAACTTCT TGAGACTGCA
CCACACATTA TGATAGTAAA AGCCGACGGT AAATTCCAAG AGTATCAAGA AGTAGTACAA
AAAATAAAAG ATGTTGAAGG TGTTATTGAT TATGAACCTT TTGTTTATTC TCAAGCTATA
GCCGGAAAAT CTTCCAATCT AATTCCTGTA TATGTAAGAG GCGTGATTTC AGAAAAAGAT
AAGAATTTTA TGGCTCTTGA TAAAAAATTG ATTTCTGGTA GGTATGATTT AACAGATGAT
AACATTATTC TTGGTAAGGA TGTTGCTCTT GCTTTGAATG TTTGGGTTGG AGATAGCGTA
AATATCGTGT CTCCGGTTGG AAGAAAAACG CCCATTGGCT TTTTACCAAA GCTTAAAGAG
TTTAAGGTAG CAGGAATTGT TGAATTTGGT ATTTATGAGT ATGACTCAAC GTTTGTATGT
ATGAGTTTAG AAAATGCTCA AAGCTTTTTT GATTTAAACG GTGCAATAAC AGGTATTCAG
CTAAAAATTA AAGACCCATT TAATCCAAGC ATAGTAAAAG AAAAATTAGA AAAAAGATTA
GATTTTCCTT ACATCGTCAG GTCATGGACT GATATGAATA AAAGCTTATT CCAAGCTCTA
CAGCTTGAAA AGTTTGCAAT GTTTCTTGTG ATAGCTTTAA TTGTAGTTGT TGCATCTTTT
AACATTTCAA GCTTAATAGC AACAAAAAGC AGGGAAAAAA GAAAAGAAAT TGCGATCTTA
AAAACCATCG GAGCAGACAG CAATTTTATA AAAAAGATAT TTATTTCACA AGGCTTGATA
ATAGGATTTA TTGGAACATC TCTGGGTCTT ATTATTGGTT TATCCGTAGT ATACATAGGT
GATACATTCC ATTTAGTAAA ACTAAATCCG GAGGTTTATT TAATAAATTA TCTTCCAATG
AAGATTTCAA TTTTAGAAGT CTTTATAATT GCTTTATCTT CTATGCTTAT ATGCTTTTTA
TCTTCTTTAT TTCCGGCTAT TTCTGCATCT AAGGAAGTGC CTGCTGAGGT TTTAAGATAT
GATTAA
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| Protein sequence | MPLYLKIALR YLFSTKSKLL SFMSIISIIG ITLGVAALII TMAVMGGFMY GIKSKLLETA
PHIMIVKADG KFQEYQEVVQ KIKDVEGVID YEPFVYSQAI AGKSSNLIPV YVRGVISEKD
KNFMALDKKL ISGRYDLTDD NIILGKDVAL ALNVWVGDSV NIVSPVGRKT PIGFLPKLKE
FKVAGIVEFG IYEYDSTFVC MSLENAQSFF DLNGAITGIQ LKIKDPFNPS IVKEKLEKRL
DFPYIVRSWT DMNKSLFQAL QLEKFAMFLV IALIVVVASF NISSLIATKS REKRKEIAIL
KTIGADSNFI KKIFISQGLI IGFIGTSLGL IIGLSVVYIG DTFHLVKLNP EVYLINYLPM
KISILEVFII ALSSMLICFL SSLFPAISAS KEVPAEVLRY D
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