Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1562 |
Symbol | |
ID | 6331157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1610656 |
End bp | 1612257 |
Gene Length | 1602 bp |
Protein Length | 533 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642657837 |
Product | PEGA domain protein |
Protein accession | YP_001931714 |
Protein GI | 188997463 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00305043 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG GTTTATGGTT TATGGTTTTT CTTATCTTCT CGTCATTTAT CCTTTCTTCT TGTGAAGGTA AAGGAAAAAT TTCTATTCAA GAGCCAAAAA ATGCAGATGT TTACATTAAT GGAAAACATG TTGGGAAAAC GCCCCTTGAA TTGGAATTAA AAGAAGGTAG TTATGACATT ACTGTGGCAA CAACAGAATT TGATAGAGAT ACACAAAAAG GTGTTTGGGT TTATTATGAT AAAACAACAA AATTAGTATT CAATCCAAAG CCAACTGGTA TTCTTCAAGC AGACTCTACA CCACAAGGTG CAACTGTTAT GGAAGGAAGA AATTACATCG GTACAACTCC GTTTAAAGAG TATCTTCCTG TTGGAAAACA TCTTATTATC TTTAAACATG GAGCTGTAGG TACTTCAAGA AAAGTAATTA TTGAATACGG GAAGACAACG TCTATATTTG TAAATCTAAC AAAAGCTGTT ATTCATCTAA ACGCAAATCC ACAGGATGCT AAAATTTATG TAGATGGAAA AGAAATTGGA ACTTCACCAC AAAACGTTGA GCTTGATGAG GGTGTTCACA AAATTACTGT AGAAAAAGAT GTATATAAAG ACACTTTCAC TATAAAAGTT AAAAAGGGTG ATGAGTTTTA TGTTAATTAC ACCCTTGAAG ATGTTCAGCT TCCACCTGTT CAAGCTTATG GACCATTATA CATGACAAAA GATTACAAAT ATTTTGTATC CTTAGGAAAA GCTGGAATTT ATTTCTGGGA TATAACAGAC TTAAAACCAC ATATCTCTTT ATGGGATCCG GAGGATGTAA GAAACTTTGA TAAATTCTCA ATCTTTGCAA TTTCTGACGA TGGAAAATTC ACAACTGCAA TAAAACCTAT CAAAGCACTT GCATACAAAT ATAAAGACAT GAAAAATCCT GTAAAAATTC TTGTTTGGGA CAATTCTACA GCCTCTGTAA TTGTAAATAA AGTATTTGAC GTAAATGCAT CTTTAATTTC TTTTGGAAAA GGTGGAAATA ATGTATATGT CTTCTCAAAA GACGGTAAGG GATTTGTATT AGATGCTAAA TCCGGCAATA AAATTAAAGA TCTTTCTTTA AATGAATCAT TATCTGTGGT AAAAGGATAT AACAACAAAA TCTATACAGG AACAGAAAGC GGAAAATTAA TTGTATTTGA TACAAATTCA GATAACATAG AGAAATCAGA AAATATATCT TCTGGAAGAA TAAATGATAT TCAAGTTTCT AAGGATGGTA AATATTTAGT GATAGCTTCA AAAGAAGCTA AGGTCTTAAA TTTAGCTGAC TTAAGCGTGT TTAAAAATGT TTCATCTAAT ACAACTGTAT TATCAGCTAA CTTATCCCCA TCAAACAGCA AAATTGCTTT AGCTAAGGCG GACAAGACTG TGGACGTTTA CGATATCAAT GGAAGTAGGC TTTACACAAT TAGCAACTTT ACAGCACAGC CAATATCTGT TATTTTTGCA ACTGAAGAAA TCACAATCAC AGCATCTTCT GTGGAAAACC CAACAATCGA CCTCTGGTAC AATGGAAAAT TACTAAGAAA ATGGGTCCAA ACTATAGAGT AA
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Protein sequence | MRKGLWFMVF LIFSSFILSS CEGKGKISIQ EPKNADVYIN GKHVGKTPLE LELKEGSYDI TVATTEFDRD TQKGVWVYYD KTTKLVFNPK PTGILQADST PQGATVMEGR NYIGTTPFKE YLPVGKHLII FKHGAVGTSR KVIIEYGKTT SIFVNLTKAV IHLNANPQDA KIYVDGKEIG TSPQNVELDE GVHKITVEKD VYKDTFTIKV KKGDEFYVNY TLEDVQLPPV QAYGPLYMTK DYKYFVSLGK AGIYFWDITD LKPHISLWDP EDVRNFDKFS IFAISDDGKF TTAIKPIKAL AYKYKDMKNP VKILVWDNST ASVIVNKVFD VNASLISFGK GGNNVYVFSK DGKGFVLDAK SGNKIKDLSL NESLSVVKGY NNKIYTGTES GKLIVFDTNS DNIEKSENIS SGRINDIQVS KDGKYLVIAS KEAKVLNLAD LSVFKNVSSN TTVLSANLSP SNSKIALAKA DKTVDVYDIN GSRLYTISNF TAQPISVIFA TEEITITASS VENPTIDLWY NGKLLRKWVQ TIE
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