| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1559 |
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| Symbol | |
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| ID | 6331551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1604462 |
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| End bp | 1606348 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657834 |
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| Product | methionyl-tRNA synthetase |
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| Protein accession | YP_001931711 |
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| Protein GI | 188997460 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[R] General function prediction only |
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| COG ID | [COG0073] EMAP domain
[COG0143] Methionyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0981514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGAGA AATTCTACGT CACAACACCA ATATACTACG TTAATGATGT TCCACACTTA
GGACATGCAT ATACTACTGT TGCGGCGGAT GTTCTTGCAA GATATTATAG ACAAATTGGA
GTAAAAACAT TTTTCTTGAC AGGAACAGAT GAGCATGGTC AAAAGATTCA AAAAACAGCA
GAAGAAAAAG GAATTTCTCC AAAAGAGCTT GCAGATAAAA CTCATTTAGC ATTTAAAGAG
CTTTGGAAAA AGCTTAATAT CAGCTATGAT AGATTTATCA GAACCACAGA CCCAGACCAC
ATAAAAGCTG TTCAGCATAT CTTTCAAAAA TGCTATGAAA ATGGAGATAT TTATCTTTCT
GAATATGAAA GCTATTACTG CGTTGGATGT GAAGAGTTTA AAACAGAAAC AGAGATAAAA
GATTATGATT ATAAATGCCC TATCCACTTA AAGCCTTGCG AAAAAGTCAA AGAAGAAAGC
TACTTTTTCA GATTATCTAA ATACACAGAT AAACTTCTTG AATTTTACGA GAAAAACCCG
GAGTTTATCT TGCCAGATTT TAGAAAAAAT GAAGTTGTAT CCTTTGTAAA ACAAGGATTA
AAAGACCTTT CTGTATCAAG GAAAAGAGAC CGTGTAGCAT GGGGTATCCC TGTTCCTTTT
GACCCATCTC ACACTATTTA TGTATGGTTT GATGCACTTA CTAACTATCT GACAGCTGTT
GGATATCCAG AAAACCTTAA CGAGTTTTGG CCTGCCGATG TTCATATAGT TGGTAAAGAT
ATTTTAAGAT TTCATGCTGT ATATTGGCCG GCATTTTTAA TGAGTGCAAG ACTTGAAATT
TCGAAAAAAG TCTTTGCCCA TGGTTGGTGG ACGGTAGAGG GTCATAAAAT GTCTAAATCC
CTTGGAAACG TAGTAGACCC ATTTAAAGCA GCAGATGAGT TTGGCGTTGA CAAGCTTAGA
TACTTTTTAT TAAGAGAAGT TCCGTTTGGA CTTGATGGTG ATTTTTCTAA ATCAGCTGTA
ATAAACAGAA TAAACTCAGA CCTTGCAAAC GACCTTGGCA ATCTTATATC AAGAAGCTTA
ACGATGATTC ATAAATTCCA AAATGGAAAA ATAGAAAAAC CTTCTGTTTT CAAAGAGATA
GAAGAAGAGT ATAAAAATGT TTATTCTAAA ACCTTGGAAA ATTATAAAAA TTTTATTCAA
AAGTTAGAGT TTAGCAAAAG TCTTGAAGAA GTTTGGCAGT TTATAGATTG GCTTAATAAA
TATATTGTAA AAGTAGAACC TTGGAAGTTA AACAAAGAAG ATAAAGAGTA TCTAAAGACA
ACGCTTTACA CAGTTGTAGA TGGAATATAT GCTGTTGTAT GGATGCTAAA CCCATTTATG
CCACAAAAAA TGGCAGAAGC TTTAAGTATG TTAAACATAA ATGAAATCAA GAAAGATATT
AAGCCTTATA GCTTTCCGGT AGAAATTACT ATAAATCAAG TGGTTCCATT ATTCCCAAGA
ATTGAGATAA AGGAGGAAGA AAAAAAGATG GAAGAGATAA AAAAAGAGGA AGTAAAACAA
GAAGAATACA TCACTATTGA TGATTTTGCA AAAATAAAAA TGAGAGTTGG AAAAGTGTTA
GAAGCTGAAA AAGTTGAAAA ATCAGATAAA CTTTTAAAGT TAAAAGTAAG TCTTGGAGAT
GAAGAAAGAA CAATAGTTTC AGGTATTGCA CAGTATTACG AGCCTCAGGA ACTTATAGGT
AAAAATGTAA TCGTTCTTGC AAATTTAAAG CCAAGAAAAA TTTTTGGAAT AGAGTCTCAC
GGAATGTTAT TGGCGGCAAA AGATGGAGAA AGATTGACAG TACTAACTAC AGATAAAGAT
GTTGGGGTAG GAAGTCCAGT TTCTTAA
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| Protein sequence | MQEKFYVTTP IYYVNDVPHL GHAYTTVAAD VLARYYRQIG VKTFFLTGTD EHGQKIQKTA
EEKGISPKEL ADKTHLAFKE LWKKLNISYD RFIRTTDPDH IKAVQHIFQK CYENGDIYLS
EYESYYCVGC EEFKTETEIK DYDYKCPIHL KPCEKVKEES YFFRLSKYTD KLLEFYEKNP
EFILPDFRKN EVVSFVKQGL KDLSVSRKRD RVAWGIPVPF DPSHTIYVWF DALTNYLTAV
GYPENLNEFW PADVHIVGKD ILRFHAVYWP AFLMSARLEI SKKVFAHGWW TVEGHKMSKS
LGNVVDPFKA ADEFGVDKLR YFLLREVPFG LDGDFSKSAV INRINSDLAN DLGNLISRSL
TMIHKFQNGK IEKPSVFKEI EEEYKNVYSK TLENYKNFIQ KLEFSKSLEE VWQFIDWLNK
YIVKVEPWKL NKEDKEYLKT TLYTVVDGIY AVVWMLNPFM PQKMAEALSM LNINEIKKDI
KPYSFPVEIT INQVVPLFPR IEIKEEEKKM EEIKKEEVKQ EEYITIDDFA KIKMRVGKVL
EAEKVEKSDK LLKLKVSLGD EERTIVSGIA QYYEPQELIG KNVIVLANLK PRKIFGIESH
GMLLAAKDGE RLTVLTTDKD VGVGSPVS
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