Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1542 |
Symbol | |
ID | 6332060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1584488 |
End bp | 1586221 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642657817 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_001931694 |
Protein GI | 188997443 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.000862893 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA GGAGTTTAAT GTTTTATCTA CTAAGTATAG TTGTTGTAGG ATTTGCCTTT GCAGCCGGCG GAGTGGAAGG ACCGGTTCAA AAGCAAGCTG TAAACCCACT TGCAATAACG ATGTTTATAA TCTTTGTTGC TGCAACGCTT GGAATTACAT ATTGGGCTGC AAAAAGAACA AAAACAGCTA AGGATTTCTA CACAGCAGGC GGTGGAATTA CAGGATTTCA AAATGGTTTA GCAATAGCTG GTGATTACAT GTCTGCTGCA TCTTTCCTTG GAATTGCTGG ACTTGTTTAT ACATCCGGAT ATGATGGATT GCTTTACTCT ATTGGTTTCT TGGTTGGTTG GCCTATTGTT ATGTTCTTAC TTTCTGAGCC ACTTAGAAAT CTTGGAAAGT ATACCTTTGC AGACGTAACA TCTTTTAGAC TTGAACAAAG AAGAATAAGA ATTCTTGCTG CAATTGGTTC TCTGTCTGTT GTAACATTCT ATCTTATCGC ACAAATGGTT GGTGCTGGTA AGCTTATACA GTTGTTATTT GGTTTACCTT ACTCAACGGC TGTTATAGTT GTTGGTTCAT TAATGATAAT CTACGTTGCG TTTGGTGGAA TGCTTGCAAC AACTTGGATT CAGATTATAA AAGCTATCTT ACTACTTGGT GGTGCTTCAT TTATGGCGTT TATGGTACTA CTTCATTTTG GATTTAGTTT TGAAAATCTC TTCCAAACAG CCGTGTCTGT TCACTCAAAA GGTGAAAAGA TAATGGCTCC CGGTGGTCTT GTTTCTGACC CATTAAACGC TATCTCTCTT GGACTTGCTT TAATGTTTGG AACAGCTGGA TTACCACACA TCTTAATGAG ATTCTTTACA GTTCCTAACG CAAAAGAAGC AAGAAAATCA GTATTCTTTG CAACAGGATT TATTGGATAC TTCTACATCT TAACGTTCAT AATTGGATTT GGTGCTATTG CTTTATTCAT TCAACATCCA GAATACTTCC AAAATGCTAA ACAAATCGTT GTTGATGGAA TTACTAAAAT AGTTGATGCT AACGATCCTA CTAAAAACTT GATCGGTGAT AAAAAGGCTC TTATTGGCGG AGAAAATATG ACAGCTATTC ACTTAGCTGA AGCTGTTGGC GGACCTGCGT TTATGGGATT CATCTCTGCG GTTGCTTTTG CTACAATCCT TGCAGTAGTA TCCGGTTTAA CACTTGCCGG AGCTTCTACT GTATCCCACG ACCTTTACGC TAACGTTTTT GCAGAAGAAA AAGATGAACA AAAAGAAGTT AAAGTTTCCA AAATAGCTAC AATTATCATT GGTATCTTTG CAATCGTTCT TGGAATTGTT TTTGAAAAAC AAAACGTTGC GTTTATGGTT GGTTTAGCTT TTGCAATTGC CGCATCTGTT AACTTCCCAA TTCTTATCTT ATCTATCTAT TGGAGAAATT TAACAACAAC GGGTGCATTC TGGGGCGGAC TTGCCGGCTT AGTTGTAGCT CTTGTTTTAA TCGTTATCTC TCCGACAGTT TGGGTTGATG TACTCAAAAA TCCAGAACCA ATCATAAAAC TCAAAAACCC GGCTATCTTC TCAATGCTAA CTACTTTTGT ATTAACAATA CTTATCTCTA AGCTTGACAA CAGCCAAAGA GCAAAAGAAG ACAGAGAAGG ATTTGAACCA CAATATATTA GAACTCAAAC AGGTATAGGC GCAGAAGGTG CTGTACATCA TTAA
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Protein sequence | MTKRSLMFYL LSIVVVGFAF AAGGVEGPVQ KQAVNPLAIT MFIIFVAATL GITYWAAKRT KTAKDFYTAG GGITGFQNGL AIAGDYMSAA SFLGIAGLVY TSGYDGLLYS IGFLVGWPIV MFLLSEPLRN LGKYTFADVT SFRLEQRRIR ILAAIGSLSV VTFYLIAQMV GAGKLIQLLF GLPYSTAVIV VGSLMIIYVA FGGMLATTWI QIIKAILLLG GASFMAFMVL LHFGFSFENL FQTAVSVHSK GEKIMAPGGL VSDPLNAISL GLALMFGTAG LPHILMRFFT VPNAKEARKS VFFATGFIGY FYILTFIIGF GAIALFIQHP EYFQNAKQIV VDGITKIVDA NDPTKNLIGD KKALIGGENM TAIHLAEAVG GPAFMGFISA VAFATILAVV SGLTLAGAST VSHDLYANVF AEEKDEQKEV KVSKIATIII GIFAIVLGIV FEKQNVAFMV GLAFAIAASV NFPILILSIY WRNLTTTGAF WGGLAGLVVA LVLIVISPTV WVDVLKNPEP IIKLKNPAIF SMLTTFVLTI LISKLDNSQR AKEDREGFEP QYIRTQTGIG AEGAVHH
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