Gene SYO3AOP1_1542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1542 
Symbol 
ID6332060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1584488 
End bp1586221 
Gene Length1734 bp 
Protein Length577 aa 
Translation table11 
GC content38% 
IMG OID642657817 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_001931694 
Protein GI188997443 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000862893 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAAAA GGAGTTTAAT GTTTTATCTA CTAAGTATAG TTGTTGTAGG ATTTGCCTTT 
GCAGCCGGCG GAGTGGAAGG ACCGGTTCAA AAGCAAGCTG TAAACCCACT TGCAATAACG
ATGTTTATAA TCTTTGTTGC TGCAACGCTT GGAATTACAT ATTGGGCTGC AAAAAGAACA
AAAACAGCTA AGGATTTCTA CACAGCAGGC GGTGGAATTA CAGGATTTCA AAATGGTTTA
GCAATAGCTG GTGATTACAT GTCTGCTGCA TCTTTCCTTG GAATTGCTGG ACTTGTTTAT
ACATCCGGAT ATGATGGATT GCTTTACTCT ATTGGTTTCT TGGTTGGTTG GCCTATTGTT
ATGTTCTTAC TTTCTGAGCC ACTTAGAAAT CTTGGAAAGT ATACCTTTGC AGACGTAACA
TCTTTTAGAC TTGAACAAAG AAGAATAAGA ATTCTTGCTG CAATTGGTTC TCTGTCTGTT
GTAACATTCT ATCTTATCGC ACAAATGGTT GGTGCTGGTA AGCTTATACA GTTGTTATTT
GGTTTACCTT ACTCAACGGC TGTTATAGTT GTTGGTTCAT TAATGATAAT CTACGTTGCG
TTTGGTGGAA TGCTTGCAAC AACTTGGATT CAGATTATAA AAGCTATCTT ACTACTTGGT
GGTGCTTCAT TTATGGCGTT TATGGTACTA CTTCATTTTG GATTTAGTTT TGAAAATCTC
TTCCAAACAG CCGTGTCTGT TCACTCAAAA GGTGAAAAGA TAATGGCTCC CGGTGGTCTT
GTTTCTGACC CATTAAACGC TATCTCTCTT GGACTTGCTT TAATGTTTGG AACAGCTGGA
TTACCACACA TCTTAATGAG ATTCTTTACA GTTCCTAACG CAAAAGAAGC AAGAAAATCA
GTATTCTTTG CAACAGGATT TATTGGATAC TTCTACATCT TAACGTTCAT AATTGGATTT
GGTGCTATTG CTTTATTCAT TCAACATCCA GAATACTTCC AAAATGCTAA ACAAATCGTT
GTTGATGGAA TTACTAAAAT AGTTGATGCT AACGATCCTA CTAAAAACTT GATCGGTGAT
AAAAAGGCTC TTATTGGCGG AGAAAATATG ACAGCTATTC ACTTAGCTGA AGCTGTTGGC
GGACCTGCGT TTATGGGATT CATCTCTGCG GTTGCTTTTG CTACAATCCT TGCAGTAGTA
TCCGGTTTAA CACTTGCCGG AGCTTCTACT GTATCCCACG ACCTTTACGC TAACGTTTTT
GCAGAAGAAA AAGATGAACA AAAAGAAGTT AAAGTTTCCA AAATAGCTAC AATTATCATT
GGTATCTTTG CAATCGTTCT TGGAATTGTT TTTGAAAAAC AAAACGTTGC GTTTATGGTT
GGTTTAGCTT TTGCAATTGC CGCATCTGTT AACTTCCCAA TTCTTATCTT ATCTATCTAT
TGGAGAAATT TAACAACAAC GGGTGCATTC TGGGGCGGAC TTGCCGGCTT AGTTGTAGCT
CTTGTTTTAA TCGTTATCTC TCCGACAGTT TGGGTTGATG TACTCAAAAA TCCAGAACCA
ATCATAAAAC TCAAAAACCC GGCTATCTTC TCAATGCTAA CTACTTTTGT ATTAACAATA
CTTATCTCTA AGCTTGACAA CAGCCAAAGA GCAAAAGAAG ACAGAGAAGG ATTTGAACCA
CAATATATTA GAACTCAAAC AGGTATAGGC GCAGAAGGTG CTGTACATCA TTAA
 
Protein sequence
MTKRSLMFYL LSIVVVGFAF AAGGVEGPVQ KQAVNPLAIT MFIIFVAATL GITYWAAKRT 
KTAKDFYTAG GGITGFQNGL AIAGDYMSAA SFLGIAGLVY TSGYDGLLYS IGFLVGWPIV
MFLLSEPLRN LGKYTFADVT SFRLEQRRIR ILAAIGSLSV VTFYLIAQMV GAGKLIQLLF
GLPYSTAVIV VGSLMIIYVA FGGMLATTWI QIIKAILLLG GASFMAFMVL LHFGFSFENL
FQTAVSVHSK GEKIMAPGGL VSDPLNAISL GLALMFGTAG LPHILMRFFT VPNAKEARKS
VFFATGFIGY FYILTFIIGF GAIALFIQHP EYFQNAKQIV VDGITKIVDA NDPTKNLIGD
KKALIGGENM TAIHLAEAVG GPAFMGFISA VAFATILAVV SGLTLAGAST VSHDLYANVF
AEEKDEQKEV KVSKIATIII GIFAIVLGIV FEKQNVAFMV GLAFAIAASV NFPILILSIY
WRNLTTTGAF WGGLAGLVVA LVLIVISPTV WVDVLKNPEP IIKLKNPAIF SMLTTFVLTI
LISKLDNSQR AKEDREGFEP QYIRTQTGIG AEGAVHH