Gene SYO3AOP1_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1540 
Symbol 
ID6332018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1582775 
End bp1584145 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content36% 
IMG OID642657815 
Productouter membrane porin 
Protein accessionYP_001931692 
Protein GI188997441 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000339272 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CACTTTTAGC AGCAGCATTG CTATCAGTTA CAGTAAGCCA ATCTATGGCA 
GCTAATGACC TTGAATCCGC ATTCAAAGAA TCAAAGGTCA TGGGGCAGCT TAGGGCTTTC
TACATTGACA GAGATTATGA TGTTGTAAAC AGTAAAAATG ATAGGTCAGC TTTTGCAATT
GGTGGAAAGT TTGGCTTTGA GACTGCAGCA GTAAATGGCT TAAAATTTGG AATCATGGCT
TACACTACAA ACGGAATCAA CACAAATCGT GAAAGTTGGC GAAATAATCC ACCGTATAAC
GGAAACCCTC ATATGGACCC ATCTTTATTT GGAAAAGATA GAAAAAGCGT AACTTATATC
GGTCAGTTGT ATTTAGATTA CAAATATCAA AACACAGCTG TTAAGATAGG AAGACAAGAG
ATTAACACTC CAATGGCTGG CATGGACGAT GCAAGAATGC TTCCAAACCT TTTTGAAGGT
GCATTAATCA CAAATAAAGA TATTCCAAAA ACAACCATCA TAGCAGGACA CTTTTGGAAT
ATGGCATATG GAACATTTGC AAACGCTTAT TCTGCTTGTT CTAATTTAGG TTTACAATCA
GGTTATGGTT GCGGTGGATA TACTACTCCT AATCAGGGCT TAGCTAAATA TGACACAGGA
AATTTCTTAA ACATGGGTAA ACAAGCTATT GGAAAAGCAA ACGCCGGTGT TTCTGTGATT
GCTGCAATCT ATGAAGGGAT ACCAAACTTA AAGCTTCAAG CTTGGGACTA CTACGCATGG
GATATGCTTA ACATTTTATA CTTACAAGGT GATTATACGT TAAAACTATC TGATGTAAAA
ACTACATTGT CAGCTCAGTA TATCAACGAA ACAAACGTTG GAAACAACAT TAAAAATATA
TTTGGAAAAG AAGTTGGGGC GAATTTATTT GGTGCTAAGG TAAACTTTAA TGTTCCAGTA
CCTGTAGTTG AAAACTTTAA TCTTTATGCG GCATACTCTC AAACCGGAAA AGATGAAGGA
AAACTTTTAA ACGGTGGATT AATCACTCCA TGGGGCGGAA CACCGGGATT TGTACAAGGT
ACTGTTACAA GACTTGGTTA TGTAGCCGAT ACATCTGCAT GGAAAGTTGG AACATCTTTT
GACATAATCA AAGGATTAAA CTTACATCTT GCATACTCGT ATTTCAATGT AGGAAGTAAA
GCTCAGTATT ACAATAGAAC CCACGATGCT TCAGAAACAA ACTGGGACTT AACATGGAAA
TGTAGATTAA TTAAAAACCT TGAATTAAAG GCAAGAGGAA TTTACACATG GAACTTTGTA
CCGGGTCAAA ACTTTACAGA ATACAGACTT ATCGCAAATT ATAATTTCTA A
 
Protein sequence
MKKTLLAAAL LSVTVSQSMA ANDLESAFKE SKVMGQLRAF YIDRDYDVVN SKNDRSAFAI 
GGKFGFETAA VNGLKFGIMA YTTNGINTNR ESWRNNPPYN GNPHMDPSLF GKDRKSVTYI
GQLYLDYKYQ NTAVKIGRQE INTPMAGMDD ARMLPNLFEG ALITNKDIPK TTIIAGHFWN
MAYGTFANAY SACSNLGLQS GYGCGGYTTP NQGLAKYDTG NFLNMGKQAI GKANAGVSVI
AAIYEGIPNL KLQAWDYYAW DMLNILYLQG DYTLKLSDVK TTLSAQYINE TNVGNNIKNI
FGKEVGANLF GAKVNFNVPV PVVENFNLYA AYSQTGKDEG KLLNGGLITP WGGTPGFVQG
TVTRLGYVAD TSAWKVGTSF DIIKGLNLHL AYSYFNVGSK AQYYNRTHDA SETNWDLTWK
CRLIKNLELK ARGIYTWNFV PGQNFTEYRL IANYNF