| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1526 |
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| Symbol | |
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| ID | 6332329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1568362 |
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| End bp | 1569027 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657803 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_001931681 |
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| Protein GI | 188997430 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATACCAA TTAAAGATGA TGTACCTACA AGGTCATTCC CATTAATAAC TTTACTTTTG
ATAGGTGTTA ATGTAGGTGT TTTTCTTCAT GAAATGAGTT TATCCGATGA AGAGCTTGAA
ATATTCGTTA GGACTTATGG GCTTCTTCCT CTTGACCTTA TTCATTTTAA TCTTTTAAAT
TTTATAACAC ATATGTTTAT TCATGGAGAT ATTGCACATA TTTTTGGAAA CATGCTATTT
TTATGGATTT TTGGCAATAA TGTTGAAGAT GCACTTGGAA AATTTAGATT TTTAATTTTA
TATTTTTTGT CCGGATTTGC TGCTGCAATA CTTCAATCTG CAGTTGCTAT ATTAATGGGA
GATATAAACA TACCTATGGT TGGAGCATCC GGAGCAATTA GCGGTATAAT AGCGGCTTAC
GGAAAGCTTT ATCCCTTTGC AAGAGTTTAT GCATTTATTC CACCGTTTAT ATTCTTCATT
TTTGCTCTTC CTGCTTGGTT TTTTATAGGC TATTGGTTTG TTATTCAAGT TTTATCAGCC
ATGTTTATTC CAACATCTCT TGGCGGTGTA GCTTGGTATG CCCATATTGG TGGATTTCTT
GCAGGTTGGT ATCTAATAGA TAATCTATAC CCAAGAGCTA AAAAATTTGT GATATATACG
AGGTAA
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| Protein sequence | MIPIKDDVPT RSFPLITLLL IGVNVGVFLH EMSLSDEELE IFVRTYGLLP LDLIHFNLLN
FITHMFIHGD IAHIFGNMLF LWIFGNNVED ALGKFRFLIL YFLSGFAAAI LQSAVAILMG
DINIPMVGAS GAISGIIAAY GKLYPFARVY AFIPPFIFFI FALPAWFFIG YWFVIQVLSA
MFIPTSLGGV AWYAHIGGFL AGWYLIDNLY PRAKKFVIYT R
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