| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1511 |
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| Symbol | |
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| ID | 6332191 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1554682 |
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| End bp | 1555533 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657789 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001931667 |
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| Protein GI | 188997416 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 63 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGGAA TACTTTTAGT AAATAAACCA AAGTTTATAA CTTCAAACGA TTTGGTGATA
AAGATAAAGA AACATCTTAA TGAAAAAATG GGTCACACAG GCACACTTGA TTATGCAGCA
TCGGGCTTGA TGGTTTTAAC AGTAGGGCAA GGGACAAAAA TAACTCAGTA TTTACAAAAA
CTTGATAAGC AGTACATAGC AGAGGGAAAA CTTGGAGAAA TTACAGACAC ATACGATAGC
CAAGGCAAAA TTATACAAAC AAAACCTGTT GAGATTGATG AAGAAAAGTT AAAAGAGATA
ATTTTTTCTT TTGTAGGAGA ATACTATCAG ACACCGCCGC CGTATTCGTC AAAAAGGATA
GGTGGAACAA GGGCTTATAA ACTTGCAAAA AAAGGAGTAG AAGTTCAGCT AAAACCTGTA
TTAATAAAAA TATACGGCAT AGAAATCTTA GAGATAAATC TACCATACTT TAAAATAAAA
GTTGACTGTT CTTCAGGTAC TTATATTAGA AGCTTGATAA AGGATATTGG AGACAAAGCA
GACTGCGGAG CTTACATGAC AGATTTAGTT AGAACTAAAA TAGGACAGTT TGATTTAAAA
GATGCTTTAT CTTTTGAAGA AATATTAAAG AAAAATCCAA ACGAGATAAA GCTAATCAGC
CTAAAAGATG CGTTATACTT CTTACCGGAA ATTAAACTAA ATCAAGATTA TGAAAAAAGA
TTTAAACATG GACAAAAAAT AAAAGTTGAC TGTATAGAAT CAAAAGATAT AAAGGTTTTA
AATGAAAACC ACGAGCTGAT AGGAATAGGA GAGATAAAAG ACTGTATTTT AAAGCCAAAA
ATAGTTTTGT AA
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| Protein sequence | MDGILLVNKP KFITSNDLVI KIKKHLNEKM GHTGTLDYAA SGLMVLTVGQ GTKITQYLQK
LDKQYIAEGK LGEITDTYDS QGKIIQTKPV EIDEEKLKEI IFSFVGEYYQ TPPPYSSKRI
GGTRAYKLAK KGVEVQLKPV LIKIYGIEIL EINLPYFKIK VDCSSGTYIR SLIKDIGDKA
DCGAYMTDLV RTKIGQFDLK DALSFEEILK KNPNEIKLIS LKDALYFLPE IKLNQDYEKR
FKHGQKIKVD CIESKDIKVL NENHELIGIG EIKDCILKPK IVL
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