| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1510 |
|---|
| Symbol | |
|---|
| ID | 6332190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1553466 |
|---|
| End bp | 1554707 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657788 |
|---|
| Product | FolC bifunctional protein |
|---|
| Protein accession | YP_001931666 |
|---|
| Protein GI | 188997415 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0285] Folylpolyglutamate synthase |
|---|
| TIGRFAM ID | [TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 63 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACC TGTATGACCT TTTTCAAAAA AAAGCATTTA ACATCGAGCC AGGATTAGAA
AGAATAAGGT CAGCGTTAAA AGAACTTAAT AATCCGGAGA AAAATTTTAA ATCTATTCTT
GTAGCAGGGA CTAACGGCAA AGGTTCAACA TCAGCATACT TGGAGAGTTT ACTTAGACAC
TATGGCTACA AAACAGGACT GTTTACATCT CCGCATCTGA TAAGAGAAAA CGAAAGATGG
CAGATAGACA GAAAGGAGAT TGACGATAAA AAATTACAAA ATTACATCAA TGAATTAAAA
CCAATCATAG AAAAATACAA TCTTACATAT TTTGAAGCAT GCACACTTTT AGCTTTTAAA
TACTTTTCTG ATAAAAAGGT GGATATTGCG GTTGTAGAGG TTGGTCTTGG TGGAAGGTGG
GACTCGACAA ATGTTTTAGA GCCGGAGACT TCAGTTATTA CAAATGTATC CTTTGACCAT
ATGCACATGC TCGGAAACAC ACTTTTAGAT ATAGCCTATG AAAAAACAGG CATTACAAGG
CAAGATAAAC CAGCTGTAAT AGGAAGAAAC CAACCAGAAA TTATCCATTG GCTTAAAGAA
AGAAAGATAA AAGAGTATTA CATCAAAGAT ATAGATTACT TTGTTAAAGA GATAGATTTT
AATAAATACA ACTACAAATT TAAAGAGCAT ATCTTTGAAA ATTTAGAAAT ATCAATGCTT
GGAAAAAGAC AGATAGAAAA TTCAAGCTTA GCGCTAACAA CTTTCCTGCT ATTTTTAGAC
AAGAACAACC AACCGGTTGT TGAAAACATA ATAAGAAAAG CACTCTACAA TACAAAATGG
AAAGGAAGGA TGGAAATTAT TAGCAAAAAT CCTTTTATCA TAATTGACGG AGCACATAAC
GAAGAGGGGC TTATAAAAAC ATTTCAAGAA ATAAAGGAAA TCTTTCCAAA TAAAAAGATT
TTCACTATCT TCTCATTCAT GAAAGACAAA GACACAGAAA AAATGATAAA TATAATCAAG
CAAAATAGTG ATTTCTACAT AGCTACAGTT ATGCCATTTT CTAGAGCAAT GACAGCAGAA
GATTTTAAAA ATCTTGGCAT TGAAAATGTA AAAGAAAATC ATTTAGAGGC AGTTAAAGAG
CTTAAAAACA GTGTAGATAA AGATACAATA ATATTAATCA CAGGTTCGTT ATACTTAATA
GGAGAGATCT TGAAAGATGG ATGGAATACT TTTAGTAAAT AA
|
|---|
| Protein sequence | MQNLYDLFQK KAFNIEPGLE RIRSALKELN NPEKNFKSIL VAGTNGKGST SAYLESLLRH
YGYKTGLFTS PHLIRENERW QIDRKEIDDK KLQNYINELK PIIEKYNLTY FEACTLLAFK
YFSDKKVDIA VVEVGLGGRW DSTNVLEPET SVITNVSFDH MHMLGNTLLD IAYEKTGITR
QDKPAVIGRN QPEIIHWLKE RKIKEYYIKD IDYFVKEIDF NKYNYKFKEH IFENLEISML
GKRQIENSSL ALTTFLLFLD KNNQPVVENI IRKALYNTKW KGRMEIISKN PFIIIDGAHN
EEGLIKTFQE IKEIFPNKKI FTIFSFMKDK DTEKMINIIK QNSDFYIATV MPFSRAMTAE
DFKNLGIENV KENHLEAVKE LKNSVDKDTI ILITGSLYLI GEILKDGWNT FSK
|
|---|
| |