| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1497 |
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| Symbol | |
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| ID | 6331886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1541887 |
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| End bp | 1542597 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 642657775 |
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| Product | protein of unknown function DUF558 |
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| Protein accession | YP_001931653 |
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| Protein GI | 188997402 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTAC CGAGATTTAT AGGAGAAAAA GAAGGTGATT ACTTAGTTTT AAAAGACCAA
GAATACAATC ATGCTGTTAA AGTTTTAAGA ATTAAACAAA ACGATTTAAT AGAAATCAAT
ACATTAGATG GGAATGTTTA TCTTGCTAAG GTGGAGGATG TTACTAAAAA TCAGCTTATA
GCCCTGCCAA TAGAAAAAAT CCCCGTTAAA GAAGAAGAAT TTAAAATAAC GTTATATCAA
TGTATGCCAA ACCAACTTTC AAAGATAGAT GAAATTATAG AGCCATTGTC ACAGCTTGGA
GTTTACAAAC TAATCCCTGT AATATCCAAA AACTCAGCAG TAAAAGAGCA AGACGTAACC
AAAAAACTTG AAAAATGGCA AAGAATAGCC CTTAACTCAA TAAAACAGTG TAAAAGACCA
TTTCCATTGA TTATTGAAAA ACCTATAAAA CTATATAATA TTAAATGTAA TGATGATTTA
AAAGTTGTAT TTTATGAAAA AGAGCAGCAA AATAAAGTTA AAATGCTTAT GAATAATAAT
TTCAAAACTG CGTCAGTTTT TATAGGAAAT GAAGGCGGAT TTAAAGAAGA GGAGATTGAA
TATCTTAAAA AAGAAGGTTT TATTCCATTA TCCTTAGGAG ACTACATTTT AAAAATGGAA
ACTGCTATAA TAATTGGAAT ATGTCAAATT AAGTGTATTT TAGAAAATTA A
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| Protein sequence | MSLPRFIGEK EGDYLVLKDQ EYNHAVKVLR IKQNDLIEIN TLDGNVYLAK VEDVTKNQLI
ALPIEKIPVK EEEFKITLYQ CMPNQLSKID EIIEPLSQLG VYKLIPVISK NSAVKEQDVT
KKLEKWQRIA LNSIKQCKRP FPLIIEKPIK LYNIKCNDDL KVVFYEKEQQ NKVKMLMNNN
FKTASVFIGN EGGFKEEEIE YLKKEGFIPL SLGDYILKME TAIIIGICQI KCILEN
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