Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1480 |
Symbol | |
ID | 6331651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | - |
Start bp | 1527092 |
End bp | 1527751 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 642657757 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_001931636 |
Protein GI | 188997385 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000681553 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGATAC TTTTAGTTGA AGATAATTTA GATTTAAATA ATACAATTAG AGAGGTTTTA GAATTAAACG GTTATGTAGT AGATTCAGCT TTTGACGGAA AAGAAGCTTT AAATTTTATA GAGAATTCAA GTTATGATGT AATTATATTA GATTTAATGC TTCCGGATAT TGATGGATTA GAAGTATTAA AAACTATTAG AAATAAAGGA ATAGATACGC CAGTTATAAT TCTTACTGCA AAAAACCAAA CAAAAGATAA AATAACAGGA CTTGATTTAG GAGCAGATGA TTATATTACA AAACCTTTCG ATGTTGATGA ACTTCTTGCA AGAATAAGAG CCATTGGAAG AAGAGTGTCT GCTGAAAAAA AGGATATAGT TTTAATAGAT AATTTAGAAA TAGATTTAAA AAACAAAGTT GTTAAAAAAT CTGGAAAATT CGTAGAACTA ACTCCAAAGC TTTATTGTAT TTTAGAGCAA TTAGTAAGGA ATAGAGGGAA AATTGTAAGT TATGAAACTC TATTAAGTAA ATGCTGGGAA ATAACGGAAG TACCTTCAAG AGAGACAATG AGAGCAAATA TAAAAAATTT AAGAAAATTG ATAGACCCAG ACAAGAAAAT TATAAAGACA ATAGAAGGTG TTGGATATAG AATTGAATAA
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Protein sequence | MKILLVEDNL DLNNTIREVL ELNGYVVDSA FDGKEALNFI ENSSYDVIIL DLMLPDIDGL EVLKTIRNKG IDTPVIILTA KNQTKDKITG LDLGADDYIT KPFDVDELLA RIRAIGRRVS AEKKDIVLID NLEIDLKNKV VKKSGKFVEL TPKLYCILEQ LVRNRGKIVS YETLLSKCWE ITEVPSRETM RANIKNLRKL IDPDKKIIKT IEGVGYRIE
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