Gene SYO3AOP1_1480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1480 
Symbol 
ID6331651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1527092 
End bp1527751 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content27% 
IMG OID642657757 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_001931636 
Protein GI188997385 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000681553 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATAC TTTTAGTTGA AGATAATTTA GATTTAAATA ATACAATTAG AGAGGTTTTA 
GAATTAAACG GTTATGTAGT AGATTCAGCT TTTGACGGAA AAGAAGCTTT AAATTTTATA
GAGAATTCAA GTTATGATGT AATTATATTA GATTTAATGC TTCCGGATAT TGATGGATTA
GAAGTATTAA AAACTATTAG AAATAAAGGA ATAGATACGC CAGTTATAAT TCTTACTGCA
AAAAACCAAA CAAAAGATAA AATAACAGGA CTTGATTTAG GAGCAGATGA TTATATTACA
AAACCTTTCG ATGTTGATGA ACTTCTTGCA AGAATAAGAG CCATTGGAAG AAGAGTGTCT
GCTGAAAAAA AGGATATAGT TTTAATAGAT AATTTAGAAA TAGATTTAAA AAACAAAGTT
GTTAAAAAAT CTGGAAAATT CGTAGAACTA ACTCCAAAGC TTTATTGTAT TTTAGAGCAA
TTAGTAAGGA ATAGAGGGAA AATTGTAAGT TATGAAACTC TATTAAGTAA ATGCTGGGAA
ATAACGGAAG TACCTTCAAG AGAGACAATG AGAGCAAATA TAAAAAATTT AAGAAAATTG
ATAGACCCAG ACAAGAAAAT TATAAAGACA ATAGAAGGTG TTGGATATAG AATTGAATAA
 
Protein sequence
MKILLVEDNL DLNNTIREVL ELNGYVVDSA FDGKEALNFI ENSSYDVIIL DLMLPDIDGL 
EVLKTIRNKG IDTPVIILTA KNQTKDKITG LDLGADDYIT KPFDVDELLA RIRAIGRRVS
AEKKDIVLID NLEIDLKNKV VKKSGKFVEL TPKLYCILEQ LVRNRGKIVS YETLLSKCWE
ITEVPSRETM RANIKNLRKL IDPDKKIIKT IEGVGYRIE