Gene SYO3AOP1_1478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1478 
Symbol 
ID6331649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1525913 
End bp1526725 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content23% 
IMG OID642657755 
Producthistidine kinase 
Protein accessionYP_001931634 
Protein GI188997383 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000106668 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATGGTT ATAAATACAA ATCTCAAAAA GAATATTTTA TAGTGATTGG CAAAGATGAA 
GGTTATCTTA AAAATGATTT GGAAAAGCTA AAAAAATCGA TTTTTTATTC AATCGTCCTT
GTAATAATGC TATCAAGCTT TTTAGCTTAC TCAGTTTCTG GAAGACTTTT AGAGCCAATC
AAGAAAAATA AAGAAAACCT TGAAAACGTT TTGAATATAA TCTCTCATGA TTTAAGAACA
CCTATAACTA TTATCAAAAC TAATTTTTAT TTGATGAAAG CAAAAAATTT TCAAAATATT
GAAAATAATA TAAATCAGAT AGAAAAAAAT CTTAATTATG TTCAAAATAT ACTAACAAAC
ATAGAAGCTT TAAAATCTGT TGATAAAAAA GAGATTGAGG AAATTAATAT AAATCATCTC
GTAAAAGATG TTTTAGCTAA GTTTGAAAAT AAGATTCAAG AAAAAAATTT AAGGATAGTA
TTTAGCGAAA AAGACCATAT AAAGATTAAC GCCAATTATA TTGATATTGA AGTATGTTTT
TCTAACTTAA TTGAAAATGC AATAAAATAT AACGAAAAAA ATGGAATAAT AGAGATTGAA
TTTGATAAAT CAATAGTTAA GATCAAAAAT ACAGGGAAAT CTATAAATAA ACCTAAAAAA
ATATTTGAAA AATTTTACAG AGAAAACGAT GCTGGAACTA CAGAAGGTCT CGGTTTAGGA
TTATCTATAG TTAAAAAAAT ATGTGAAAAG TATGGTTTTA AAATAAGCTA TAGCTTTAGA
GATAACATGA ATAATTTCAT AATCAAGTTT TGA
 
Protein sequence
MYGYKYKSQK EYFIVIGKDE GYLKNDLEKL KKSIFYSIVL VIMLSSFLAY SVSGRLLEPI 
KKNKENLENV LNIISHDLRT PITIIKTNFY LMKAKNFQNI ENNINQIEKN LNYVQNILTN
IEALKSVDKK EIEEININHL VKDVLAKFEN KIQEKNLRIV FSEKDHIKIN ANYIDIEVCF
SNLIENAIKY NEKNGIIEIE FDKSIVKIKN TGKSINKPKK IFEKFYREND AGTTEGLGLG
LSIVKKICEK YGFKISYSFR DNMNNFIIKF