| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1473 |
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| Symbol | |
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| ID | 6331228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1519458 |
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| End bp | 1522028 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 642657750 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001931629 |
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| Protein GI | 188997378 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000179625 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAATAA AGATTAAAAA GATTAAATTT TTATTTATCT TGCTTTTTAT ATACTTTGCA
AAGGCTGAAG AAAGGATAAT ATCCAATTAC CCTTTACCAA AAAATAACGG TGAAGAAATT
TTAAGAATAA CAAATGACCT AAATTATGTG GCTAATCTCT TTGAATTAAC AAACGACTTT
GAAAAGATAG AAATTAAAGA TGATAAGATA TTTATTACAA GAAAGCCATT TTTAAAAAGT
ATAGACATAA AAGGTAATAA ATCTTTTTGG AAAGATGAAA TAGTAGGAAT TACAGGATTA
AGAATAAATA GTGCTTTAGA TAGTGAATCC TTAAAAACAA TTCCACTTAG AATTAGACAG
TTTTACGCAG AAAAAGGCTA TTTGTTTGCA AATGCAAGCA TATCAACCAA CTTTGATGAA
AACGGTAATG CGTTTGTAAG TTTAAACATA GATGAAGGGA GAAAAATAAA GTTAAATGAT
GTGATATTTT TATCAGACCA AAAAATCTCA GAAGAAGATA AAAATCAGCT TTTAAAAGTT
CTAAATCTAA AAAAAGGGGA TATGATTTAT TTTGATAAAT TGCAAGAATC TATAGAAAAA
CTTAACGAGT ACTTAAAAAA TAATGGATAT TTTGAATCCT TTATTGTTTT ACAAGACATC
GAACAAGTGG ACAATAATTT TGCCAACATA TACATACTCA TAGACTTAAG AAGCAGGTAT
TTTATAAACT TTACCGGTAA TAACAACTTT GACAATAAAC AATTAATGAA TCTTTTAACA
TTTAAAGAAA ATGGATTTAA TTATAATGAA CTTGACCTAT CAAAAGAAAA TCTTATGAAT
TTCTATAAAT CTAATGGGTT TTTAGATGTA GATATAATAA CTCAGGTAGA AGAGCAGGAG
AAAAATCAAG GGTCGGCTGA AAAACCTTAT ATTAAGATAA ATTTTAATAT CAACGAAGGT
AAAAGATATA AGGTAGATAA GATTTTTATA GATACAGATT ATGAAGAGAT AAAATCAGAA
ATAAGTAAAT TTGCAGGCAA CTTTCATGAT AAAAACAAGC TTTTAAGCTA TTTACAGGAA
CAAGTAAAAA AACTCTATGA TAGTGGATAT ATTTCGGCAA ATTATAAGAT TGAAGAAATA
AAAAATGAAG ATAAACTTAC GTTAAAAGTA GAATTTAAAA AAGGAAAAAA ATATATCCTT
AAAGAAATAA AACAAAAGAA TTATTCAGTC AAAAAGGATT TTAAACTGCC AAAAATCTAT
AATCCACAAG AATTATTAAA TTTACAAGAT GAATTTAAAG AAAAGGCAAG GGAAGATGGA
TATTTGGATG CTGAGGTATT ACTTCAGACT GATTTGATAG AAAATAACGA TAGAATTGAT
GTTATTGCTA CATACGATTA TAATCTTGGA CAAAGATACA GAAGTGGTTT AACATTTGTT
TATGGCAGCT TTCATCTTAA CCCAAATGTA ATTTTAAAAC AATTTCCTAA AAGAGAATAT
TTTGAAAAAG AAAATTTTGA TGTTTCGATA ATTAGACTAT ATGAATCAAG ATTATTTGAT
TATATTAATC CATTAATTCT TCCTCAAGAA GAAAGAAAGA CAGTTGACAA AGCAATTTTC
GTTCACGATG ATAAAAGAGG ATTAGTGCAA GGCAGTGTTG GTTATTCAAC AGACCAACAA
TTTAAAGCTT CTGTTGCTGT TATACTCAGA AACTTATTCA ATTACGGTTA TGAATTTTCT
ACTTATATAG AACGTTCAAA CTTTCAAACA AATTATAGAC TTTCTCTTGG AAATAGGTTG
TTTAAATGGA ATTTAAGCGG ATTTGCCTCC ACATTTCTAT TTAATCAATA TCATAGAAAT
TATGATTTAA AAAGCTCAGG TTATGACTTG TTTTTTGAAA AAAGAAATAA TAAATGGGTT
AAAAGTAGTT TTAGATTAGA AAGGAAATAC AACGTCATCA CAAATGAAGG AATATTTACA
CCACTGAAAA ATTATAAAGT GATAACTACA AGTTTTGGAT TAACAGATGA CCATAGAAAC
AATAGAATTA ATCCATCAAG CGGGTATTAT AGTATTTTAA ACTTTAAAAC AACGTTTGGA
GATATTAATT ATCAATCTTT AGAGGGTTCT TTTAGATATT ACAAAGAATT TTTAGACTTT
TTTATCTTTA GTCAAAGATT TTCTACTGGT TATTCTTTCA AAAGTATAAA CGGGCTTCCT
TTGGCTGAAA GATATTTTCT TGGTGGTATT GCAAATATGA GAGGTTTTGG CTTTGAAGAA
TTATCAGGAA AGCAAAAAAT TGGCGGAAAT AGCTATTTAT TAATAAACAA CGACTTAAGG
TTTCCAATAT ATCAAAAATA TAATTTATAT TTCTTAACAT TTTTAGACCT TGGAAATGTA
TATACTAAAA GCAATGAATA TAGAAATCCT TATTTTAGAA AAACCGCCGG AATAGGTATT
TACGTTCCAA CGCCTGCTGG AAGTTTAATA TTTGATTATG CTAAAAAGTT AGACACAAAA
CCAAATGAAA ATAAGCATAG AATAGAGTTT AGCATCGGTT TAGATTTCTG A
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| Protein sequence | MKIKIKKIKF LFILLFIYFA KAEERIISNY PLPKNNGEEI LRITNDLNYV ANLFELTNDF
EKIEIKDDKI FITRKPFLKS IDIKGNKSFW KDEIVGITGL RINSALDSES LKTIPLRIRQ
FYAEKGYLFA NASISTNFDE NGNAFVSLNI DEGRKIKLND VIFLSDQKIS EEDKNQLLKV
LNLKKGDMIY FDKLQESIEK LNEYLKNNGY FESFIVLQDI EQVDNNFANI YILIDLRSRY
FINFTGNNNF DNKQLMNLLT FKENGFNYNE LDLSKENLMN FYKSNGFLDV DIITQVEEQE
KNQGSAEKPY IKINFNINEG KRYKVDKIFI DTDYEEIKSE ISKFAGNFHD KNKLLSYLQE
QVKKLYDSGY ISANYKIEEI KNEDKLTLKV EFKKGKKYIL KEIKQKNYSV KKDFKLPKIY
NPQELLNLQD EFKEKAREDG YLDAEVLLQT DLIENNDRID VIATYDYNLG QRYRSGLTFV
YGSFHLNPNV ILKQFPKREY FEKENFDVSI IRLYESRLFD YINPLILPQE ERKTVDKAIF
VHDDKRGLVQ GSVGYSTDQQ FKASVAVILR NLFNYGYEFS TYIERSNFQT NYRLSLGNRL
FKWNLSGFAS TFLFNQYHRN YDLKSSGYDL FFEKRNNKWV KSSFRLERKY NVITNEGIFT
PLKNYKVITT SFGLTDDHRN NRINPSSGYY SILNFKTTFG DINYQSLEGS FRYYKEFLDF
FIFSQRFSTG YSFKSINGLP LAERYFLGGI ANMRGFGFEE LSGKQKIGGN SYLLINNDLR
FPIYQKYNLY FLTFLDLGNV YTKSNEYRNP YFRKTAGIGI YVPTPAGSLI FDYAKKLDTK
PNENKHRIEF SIGLDF
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