| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1460 |
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| Symbol | |
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| ID | 6331598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1504651 |
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| End bp | 1505337 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 642657737 |
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| Product | 3-dehydroquinate dehydratase, type I |
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| Protein accession | YP_001931616 |
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| Protein GI | 188997365 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0710] 3-dehydroquinate dehydratase |
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| TIGRFAM ID | [TIGR01093] 3-dehydroquinate dehydratase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000000588162 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTTAAAA AAACACCAAT GATTGCACTG CCCATAACAG ACAAAGATTT AGAAATCACA
TTAAACAATG CAATTATAAA TAGTATCGAT ATTATTGAAC TACGTATAGA CCAATTTGAA
AACAAAGAAT TAAATCACAT AAAAGAAGTG GCTAATAAAG TTAAGTATTA TGATTTTTAT
ACCATCGCAA CCGTAAGAAG TAAGTTAGAA GGAGGGTCAG ATATACCGGA TTCTGAAAGA
TTGAAAATCT TCAATGCTGT TATTGATTTT GTTGATATCA TAGATATAGA GTACACATCA
ACAAACATAA AAGAAAAAGT TAAAGAAATT GCCAAAAGCA AAGGTAAATT GCTTTTAATG
TCTTATCATG ATTTTGAAAA AACACCGACA GAAGATGAAA TCCAAAAATT AATTGACGAT
TGTAAAATCC AAGGAGCAGA TATAGTAAAA TATGCCTTTA AAGCCAATAC CTTTGAAGAT
GTGGCAAGGG TTATGTGTAT CACTAATAAA AATAAGGATA AAAATATTGT TGCTATATCA
ATGGGTGAGA TTGGCAAAAT TACAAGAGTG ACTGGATTTA TGTTTGGAAG TTTGATAACA
TATACGTATA TAGGACAATC TTTCGCACCA GGTCAAATAG AAGTTAAAAA ACTAAATGAA
TTAATAGAAT TTTTCAAAGG AGGTTAA
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| Protein sequence | MFKKTPMIAL PITDKDLEIT LNNAIINSID IIELRIDQFE NKELNHIKEV ANKVKYYDFY
TIATVRSKLE GGSDIPDSER LKIFNAVIDF VDIIDIEYTS TNIKEKVKEI AKSKGKLLLM
SYHDFEKTPT EDEIQKLIDD CKIQGADIVK YAFKANTFED VARVMCITNK NKDKNIVAIS
MGEIGKITRV TGFMFGSLIT YTYIGQSFAP GQIEVKKLNE LIEFFKGG
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