| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1442 |
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| Symbol | |
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| ID | 6331196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1486223 |
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| End bp | 1487329 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657719 |
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| Product | oxygen-independent coproporphyrinogen III oxidase |
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| Protein accession | YP_001931598 |
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| Protein GI | 188997347 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00539] putative oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000000616139 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAAAAG GAATTTATAT ACACATACCA TTTTGCAATA TAAAATGTCC ATACTGTGAT
TTTACATCTT TTGTTTGGCA AGAAGATAAA TTGAAAGATA GGTACGTAGA AGCTCTTAAA
AAAGAGCTTT TGATGTACTT AGATAATGAT TTTGATATTC AAACCATCTA CTTTGGAGGC
GGAACACCAT CAACACTAAA ACCTGAAAAG ATCGCTGAAA TAATAGAGTT TATAAAAAAT
AACGTAAAGC ATCAAAAAAA TCTTGAGATA ACGGTTGAAA TAAATCCAAA AACATATGAA
TATAATGAGT TTAAAATCAT AAAAGATGCA GGAGTAAACA GAATAAGCAT TGGCAATCAA
TCATTTGTAG AAAAAAATCT TACAATGCTT GGCAGAGACC ACAAACCGGA AGATAGCTAT
AAAACCATAG AAAACTGCCT TAAAGCCGGA ATATCTAACA TAAATCTTGA TTTGATTTAT
GGAATTCAAA ACCAAACTTT GCAAGACCTT GAAAAAGATT TAGAAATATA CACATCACTA
CCTATAACTC ACATATCAGC TTATATGTTG ACTGCCTACG AAGACACACC CCTTGGAACA
CTTGTAGAAA AAGGACTTTA TCATCTACCT GACGAAGATT TAGCATATCA AATGTTTTTA
ATGATAGACC AAGCTTTACA TAACAAAAGC TTTGAAAGAT ATGAACTTTC AAACTGGGCA
AAAAAAGGCT ATGAATGTAA ACACAATCTA TTTTATTGGA CAGATGTAAA CTTTCTCGGC
ATTGGCGTTT CTGCTTGGTC TTATGTAAAT AATGAAAGGT TTGGAAATAC TAAGAATATA
AATGAGTATT TAGAGAATGT TGAAAAAGGT ATAAAACCTG TTAAGTTTAG CGAGGTTTTA
GATGAAAAGA AAAAGCATGA AGAAAAAATC TTCTTAGGCT TGAGGCTTAA AGAGGGTATA
GATGTAGATT TGATTAAGAA TAAAGATTTT CTAAAAGAGT TAGTAGATGA AGGCTATGGA
GATATAAAAG ATGGAAGGTT TTATCTACTT CCAAAGGGAA TAATGGTTAT TAATGAAATA
GTTAGGAAGG TTTTAAGTGT GTTATAA
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| Protein sequence | MIKGIYIHIP FCNIKCPYCD FTSFVWQEDK LKDRYVEALK KELLMYLDND FDIQTIYFGG
GTPSTLKPEK IAEIIEFIKN NVKHQKNLEI TVEINPKTYE YNEFKIIKDA GVNRISIGNQ
SFVEKNLTML GRDHKPEDSY KTIENCLKAG ISNINLDLIY GIQNQTLQDL EKDLEIYTSL
PITHISAYML TAYEDTPLGT LVEKGLYHLP DEDLAYQMFL MIDQALHNKS FERYELSNWA
KKGYECKHNL FYWTDVNFLG IGVSAWSYVN NERFGNTKNI NEYLENVEKG IKPVKFSEVL
DEKKKHEEKI FLGLRLKEGI DVDLIKNKDF LKELVDEGYG DIKDGRFYLL PKGIMVINEI
VRKVLSVL
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