| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1438 |
|---|
| Symbol | |
|---|
| ID | 6331192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1481017 |
|---|
| End bp | 1481634 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 642657715 |
|---|
| Product | DNA polymerase III, epsilon subunit |
|---|
| Protein accession | YP_001931594 |
|---|
| Protein GI | 188997343 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
|---|
| TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAACT TAACTATAGA AGAAGCAACG TTTACAGTAG TAGACTTAGA AACAACAGGA
CTAAATCCTA AAACAAGCGA GATAATAGAA ATTGCCGCAA TTAAGGTTGA AGGCAGTGTC
ATCACTGAAA AATTTCATAC ATTAGTAAAG CCATCAATTG GATTTATTCC GGAGCATATT
ACAAAGCTTA CAGGAATCAC AAACCCTTTA GTAATAGATA AACCAAAGAT AGAACAGGTT
TTTCCACATT TTTTAGAATT TACTAAAAAC TCAATTATCA TAGCCCATAA TGCTAAATTT
GATATATCAT TTTTAAATGA AGCATCACTT CAATTGACAG GAAAGCTTAT TCAAAATCCT
GTAATATGCA CTTTGGTTCT TGCAAATAGA TTGTTTCCGG ATTTAAAAAG TAAATCACTT
ACTAACTTAG CTTATCATTT TAACATTCCT TACCATAGGA AGCACAGAGC TTTGGCAGAT
GCAGAAGTTA CTTATGAGCT TTTTAAAAAG TTTGTTGATT ATCTTCAAAA CTATAAAGTT
GATAAAGTTA TTGATTTAAT AAGACTTTCT AATGGTAAAG ATTTAAAACT GCCATCAAAA
AGGAGAAGGT ATGTTTAA
|
|---|
| Protein sequence | MINLTIEEAT FTVVDLETTG LNPKTSEIIE IAAIKVEGSV ITEKFHTLVK PSIGFIPEHI
TKLTGITNPL VIDKPKIEQV FPHFLEFTKN SIIIAHNAKF DISFLNEASL QLTGKLIQNP
VICTLVLANR LFPDLKSKSL TNLAYHFNIP YHRKHRALAD AEVTYELFKK FVDYLQNYKV
DKVIDLIRLS NGKDLKLPSK RRRYV
|
|---|
| |