| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1433 |
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| Symbol | |
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| ID | 6331476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1475499 |
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| End bp | 1477613 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657710 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_001931589 |
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| Protein GI | 188997338 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 54 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATACTG ACGAAAGACA AAAAGAGTTA ATAAAACTTA CCTATGAATT TTTAAAACTG
GATGCAAAAA AGTTAACAAA AGAAGAAGCT AAAAAAATAG TAGAAGATCT AAGAGAAGTT
ATAAGATTTC ATGATTGGAG ATACTACGTT TTAGCTCAGC CTGTAATTTC AGACTATGAA
TACGATAAAC TTTTTAAACT GCTTAAAGAT ATTGAAGGTA AATATCCAGA ATTAATAACG
CCAGACTCCC CTACTCAAAG AGTTCCATCA GAGATAACGA AAGTTTTTCC ACAGGTAAAA
CATCTTACAC CAATGCTTTC TCTTGATAAC TCCTACAATG AGGCAGACCT GAGAGATTTT
GACAGAAGAG TTAGGGAGCT TACCGGACTT GATAAAGTTG AATATTCAGT GGAGCCAAAA
TTTGACGGTG CAGGAATTTC TTTAATATAC GAAAAAGATT TATTTGTTAG AGGTGCAACA
AGAGGAGATG GTGAAGTTGG AGAAGAGATA ACAAATAACC TTAAAGTAAT CAAAACCATT
CCATTATCTG CTAAATTTTC TCAATATGGA ATTGATAAAG TTGAAATTAG AGGTGAAGTT
TTAATAAGAA AAGACCTATT TAAAAAAATG AATGAAGAAA GATTAGAGGA AGGACTACCA
CTTTTTGCAA ATCCAAGAAA CGCTGCTGCA GGTTCCATTA GACTTCAAGA CCCAAGCGAA
GTTGCAAAAA GAAACTTAGA AGCCTTTGTT TACCAAATAA CTTATGCAGA AAAAGATGGT
AAAAATTTAC TTGGAACAGT TTTAAAGAAA CATTCAGATA ATATAAAAAT GCTTCATGAA
CTTGGCTTTA AAACCCCTTA TCCGGTCATG AAAGTTTGCA TTGGAATAGA AGAAGTTATC
CAGTACTGTG AAGAGTGGCA AAGAAAGAGA GATGCCTATC CTTACGAAAT AGACGGAATG
GTTATAAAAG TAAACGATAT ATCACTTTAC GATAAACTTG GTTTTACATC TCACCATCCA
AGATGGGCTA TAGCATTTAA ATTTAAAGCA AGACAGGCAA CGACAAAAAT AATAAACGTT
GTTTTCCAGG TTGGCAGAAC AGGGGCAATT ACTCCGGTAG CAAAATTAGA GCCGGTGGAA
ATAGGTGGTG TTATTGTTTC TTCTGTTTCT CTGATAAATG AAGATTTTAT TAGAGAAAAA
GATATTAGAA TTGGGGACAC GGTTTTAGTA GAAAGGGCTG GAGATGTTAT CCCTTATGTT
GTAATGGTTA TTAAGGAAGC AAGAACAGGA AATGAAAAAC CGATAGAATT TCCAAAAACA
TGTCCATCTT GCGGCTCTCC AATTGTTAAA CCACCGGGTG AAGCTGTATA CCGTTGTGTA
AATATTAACT GTCCTGCTCA AGTAATTGAA AGATTAATAC ATTTTGCATC TAAGGATGCA
ATGGACATAA AAGGTTTATC GGAAGCCACA ATCAGAAAAT TTTATAATTT AAAGCTTGTA
AGAACAATTC CGGATATTTA CAGACTTGAC TATAATTTGA TTAAGAATAT ACCCGGATTT
GGTCCAAAGT CAGTAGAGAA CTTGAAAAAT GCTATTGAAG AAAGCAAAAA AAGACCACTT
TACAGGTTGA TTTACGGTCT TGGTATAAGA TACGTTGGAG AAGTAACAGC TAAAACCTTA
GCATCGGCTG TGAGATGTAT TGATGATTTA AAGAATTTTA CAATCACAGA TTTAATGAAA
CTCCCGGATA TTGGCTATAA AGTTGCTTCG GAGATTTATA ATTTTTTCCA CAACCAGGAA
AATCTAAAGA TGATAGAAGA GTTAAGGGAG CTTAGAGTAA AAACCTGTCA TGAAGAAGAA
GAGAAAAAAG GTAAGCTTGC AGGTTTAAAC TTTGTATTTA CAGGAACTTT AAAATGTTGT
AGCAGAGAAA AAGCTAAAGA GATAGTAGAA AGTCTTGGAG GAAATGTTTT AGATACAGTT
TCTAAAAAAG TACATTACTT AGTAGTTGGA GAAGAACCAG GAAGTAAATT ACAAAAAGCT
CAAAAGCTTG GAACAGTGAA GATTATAAAT GAAGAAGAGT TTTTAAAGCT AATTGGTGGT
GAAAACACTG AGTAG
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| Protein sequence | MYTDERQKEL IKLTYEFLKL DAKKLTKEEA KKIVEDLREV IRFHDWRYYV LAQPVISDYE
YDKLFKLLKD IEGKYPELIT PDSPTQRVPS EITKVFPQVK HLTPMLSLDN SYNEADLRDF
DRRVRELTGL DKVEYSVEPK FDGAGISLIY EKDLFVRGAT RGDGEVGEEI TNNLKVIKTI
PLSAKFSQYG IDKVEIRGEV LIRKDLFKKM NEERLEEGLP LFANPRNAAA GSIRLQDPSE
VAKRNLEAFV YQITYAEKDG KNLLGTVLKK HSDNIKMLHE LGFKTPYPVM KVCIGIEEVI
QYCEEWQRKR DAYPYEIDGM VIKVNDISLY DKLGFTSHHP RWAIAFKFKA RQATTKIINV
VFQVGRTGAI TPVAKLEPVE IGGVIVSSVS LINEDFIREK DIRIGDTVLV ERAGDVIPYV
VMVIKEARTG NEKPIEFPKT CPSCGSPIVK PPGEAVYRCV NINCPAQVIE RLIHFASKDA
MDIKGLSEAT IRKFYNLKLV RTIPDIYRLD YNLIKNIPGF GPKSVENLKN AIEESKKRPL
YRLIYGLGIR YVGEVTAKTL ASAVRCIDDL KNFTITDLMK LPDIGYKVAS EIYNFFHNQE
NLKMIEELRE LRVKTCHEEE EKKGKLAGLN FVFTGTLKCC SREKAKEIVE SLGGNVLDTV
SKKVHYLVVG EEPGSKLQKA QKLGTVKIIN EEEFLKLIGG ENTE
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