Gene SYO3AOP1_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1383 
Symbol 
ID6331691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1421782 
End bp1424826 
Gene Length3045 bp 
Protein Length1014 aa 
Translation table11 
GC content35% 
IMG OID642657665 
Productacriflavin resistance protein 
Protein accessionYP_001931544 
Protein GI188997293 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.21579e-09 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGCT TTTTTATAAG AAGACCAATT ACAACATGGA TGTTTATGCT TGCTTTCATC 
ATTGCCGGTT TATACAGTCT TAAATATATT CCGGTTGATA GAAATCCAAA TGTAGATTTT
CCGATTGTTT CAATAACTAC AACGTATAAA GGAGCTTCTC CTTATGTAGT TGATACAAAC
GTTACAAGAA AAATAGAAGA TCAGCTTGCA ACTATAAGTG GTATAGAGGC TATAAATTCA
GCAAGTTATA CAGGGACTTC AAGAATAACA GTAATCTTTG ACCTTGATAA AGATATTGAT
ATTGCAGCTC AGGAAGTGAG GGATGCTGTA AACAGGGCGC AAAGAAGTTT TCCTGTAAAC
GTTGACCCAC CGATTGTTAG AAAAGTAGAC ACCGGAATGG CTCCAACGAT GGCTATCCTG
CTTCATGGCT ATGCTGACTA TGGAACTATG GCTTATTATG CTGACAAAGT AATCAAAAGA
GAGTTTGAAA GGGTTAAAGG AGTTGGTCAG GTAGACCTTG GAGGTTTTAG AGATTATGTA
ATGTGGGTTA GAATAGACCC GTTAAAACTT GCGGGATTTA AGTTAACACC TATGGATGTT
GTTAATGCAC TACAAAAAAA TCATGTTGAA ATTCCGGCGG GTAGAATAGA CAGTCAAAAT
AGAGAGTATA CAATAAGAGT TTATGGAAAG GGTCAATCTC CTGAAGAGAT AAATAATATC
ATAATTAAAA ATAATATAAG AATTAAAGAT GTTGGAAAGG CTGAATTTAC ATTTGATGAA
AAGAGGGGTT TAGTAAGATT TAAAGCTTTT GACTCTAAGG AAGCAGAGCC GGGTATTGCT
TTGATCATTT ACAGACAATC AAAAGAAAAC ACGGTAGAAG TCTCTAAAAG AGTCATTGAA
AAAATGAATG AGCTTAATAA ACAACTTCCA GCCGGTTTAA GATTGGACAT AAACTATGAT
GCTTCTACGT TTATTGAAAG GAGTGTAAAC GATGCTTTGC ATGAGATAGT CATCGGAGCA
CTGCTGACTG CTTTTGTAGT TTTCCTATTC TTAGGAAGTT TAAAGATGAC TTTTATACCA
TCTATGGCAA TTCCAGTGTC TGTTTTAGGA GCTATAGCTG TTTTATTCTT TGCCGGTCAA
TCTTTAAACA CATTTACACT ATTAGCTTTA GCCGTTGCAG TTGGTTTAGT TATAGACGAT
GCGATAGTTG TAATGGAGAG TATTTATAGA AGAAATGAAG AAGGATTAAC AGGTATAGAG
GCAGCAGAAA AGGGGACAAG AACAGTTGTA TTTGCTTTGC TTGCATCAAC AGCTTCTTTG
ATAGCTATTT TTATACCTAT CTTATTTGTT AAAAGTGTAA TTGGTAAGTT TTTCTTTGGA
TTTGCACTTA CGCTAATTGT AGCAATAGCA ATTTCTTACA TAGTATCTTT AAGCTTTACT
CCAATGATTA GTGCAAGATT AGTTCAAGCT AAGGAGAAAA ATATCTTTCA AAGAGCTTAT
GATAAATTTG AATCTCTTTT TGATGTTACT TTAAAATGGT CTTTAAACCA TAAAGCTATT
GTTTTAGCTA TCTCAATAGT TACAGTTATG ATTGGCTATA AACTTGCAAG CTTTGTTCCA
AAAGAGTTTA CACCGGTTGT AGATGAAGGG AGATTCCTAG TCAGATTTGA AACACCTACC
GGTTCATCTT TTGATTTTAC AGATAGAAAG GCAAAAGAGC TTGAAAAAAT AGTAGAAAAA
AATCCATATG TTTTAAGATA TGGGGTTGCT TTTGGTGAAG GTATAGCGGG AAGACCGGAG
GTTAACGGTG GAATATTCTT TATCACACTG AAAGACAGGT CCACAGGAAG ACCACATCAA
AAAGTAATCA TGGATTGGTT TAGAAATGAG TTTAGAAAGG TTCAAGATGT AAGAGCTATA
GTAGATATAC CATCAGCTGT AGGACCGGCA GCAGGAAGGT CTGCAGATGT TATGTACGTC
ATCAAAGGTC CAGAATTGCC GGTTTTATCT CAAATAGCAA ATAAATTAGA AGGACAGTTA
AGACAGACGC CGGGCTATAC AGACGTTGAT ACAGATTTAA GAATAAATAA ACCGGAGGTA
AAAGTATTTA TAGATAGAGA TAAAGCTTCA GCACTTGGCA TTTCCGTTGA AGATATAGCA
AATACGCTAA ACTTTTTGTT TGGAAAGTTT AAAATTGGCA CTTACGAAAA AGGCTCAGAA
AGTTATGACA TGATAGTTAA GGCTGATGAG GATTTTTTAA AAAGCTTTGA AAATCTCTCA
AAGGTTTATG TTAGAGGAAA AGATGGAAGT TTAGTTCCAC TTTCTAATGT AATCAAGTAT
GAATTGTCTC CAGGGTATAA CGTTATTAAC AGATATAACA GACAGTATAG CTTTACACTT
TATGCTAACG TTACAGGCGG AAAGTCAGTC GGTGATGCAG TGGCAGAGGT AGAGAATTTC
ATAAAACAAA CATTACCACC GGGATACAGC TATGAAATCG GAGGACAGAC AAAAGAGTTT
AAGAGAACGT TTTCTTATTT AGGACTTGCT TTAATCGTTG CAATCATAGC TGTGTATATG
ATTCTTGCAT CATTATTTGA AAGCTTGCTA CATCCATTTA CAGTTTTACT AACTTTACCA
CTTGCAATCT CAGGAGTATT TGGATTTATT CTATTAACCG GTACATCGCT AAACGTAACA
TCATACTTTG GAATTATTCT GCTAATTGGC TTAGTTACAA GAGATAGTGT TTTATTCATA
GAAAGAATTA TCCAGCTTAA AAAAGATGGT TTAGACACTT ACAACGCAAT CATTCAAGCA
AGGAAAGAGA GATTAAGACC AATCTTAATG ACAACTTTAA CAATAGTAGC ATCGTTAATT
CCTGTTGCAC TTGGACTTAC AGAAGGCTCA GAGATGCGTC AGCCGTTAGC AATAGCTGTA
ATCGGTGGAC TAATGACAGC ACTTCCACTG AGTTTATTTG TAATACCAAT TTTTTATATG
ATTATTGATA AAATACGTCG GGTGAGAAAT TTAATAAAAA CATGA
 
Protein sequence
MYSFFIRRPI TTWMFMLAFI IAGLYSLKYI PVDRNPNVDF PIVSITTTYK GASPYVVDTN 
VTRKIEDQLA TISGIEAINS ASYTGTSRIT VIFDLDKDID IAAQEVRDAV NRAQRSFPVN
VDPPIVRKVD TGMAPTMAIL LHGYADYGTM AYYADKVIKR EFERVKGVGQ VDLGGFRDYV
MWVRIDPLKL AGFKLTPMDV VNALQKNHVE IPAGRIDSQN REYTIRVYGK GQSPEEINNI
IIKNNIRIKD VGKAEFTFDE KRGLVRFKAF DSKEAEPGIA LIIYRQSKEN TVEVSKRVIE
KMNELNKQLP AGLRLDINYD ASTFIERSVN DALHEIVIGA LLTAFVVFLF LGSLKMTFIP
SMAIPVSVLG AIAVLFFAGQ SLNTFTLLAL AVAVGLVIDD AIVVMESIYR RNEEGLTGIE
AAEKGTRTVV FALLASTASL IAIFIPILFV KSVIGKFFFG FALTLIVAIA ISYIVSLSFT
PMISARLVQA KEKNIFQRAY DKFESLFDVT LKWSLNHKAI VLAISIVTVM IGYKLASFVP
KEFTPVVDEG RFLVRFETPT GSSFDFTDRK AKELEKIVEK NPYVLRYGVA FGEGIAGRPE
VNGGIFFITL KDRSTGRPHQ KVIMDWFRNE FRKVQDVRAI VDIPSAVGPA AGRSADVMYV
IKGPELPVLS QIANKLEGQL RQTPGYTDVD TDLRINKPEV KVFIDRDKAS ALGISVEDIA
NTLNFLFGKF KIGTYEKGSE SYDMIVKADE DFLKSFENLS KVYVRGKDGS LVPLSNVIKY
ELSPGYNVIN RYNRQYSFTL YANVTGGKSV GDAVAEVENF IKQTLPPGYS YEIGGQTKEF
KRTFSYLGLA LIVAIIAVYM ILASLFESLL HPFTVLLTLP LAISGVFGFI LLTGTSLNVT
SYFGIILLIG LVTRDSVLFI ERIIQLKKDG LDTYNAIIQA RKERLRPILM TTLTIVASLI
PVALGLTEGS EMRQPLAIAV IGGLMTALPL SLFVIPIFYM IIDKIRRVRN LIKT