| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1380 |
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| Symbol | |
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| ID | 6331688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1418585 |
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| End bp | 1419862 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 642657662 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001931541 |
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| Protein GI | 188997290 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT TAATTCTCCC CGTCTTAACA GCTTGGACGT TTTCCTACGG ACTCACCTTA
CAAGATGCTA TAAATGAAGC AGTTGCAAAC AATCCAGAGC TAAAATCTTA TAGTCAGCAG
ATAGTAACTT CTGAGTATCA GTTAAAAGCA GATGAAAATC TTCAATTTCC AACTTTTTTT
GCATCGGCAT CAGAAAAATT TTATAACAAA ACACCAATGA CAAAAATTCC TAACTTTCCA
ATCTCCTTTA AACAGTCTAA CAAAGACTTT TTTACATTCG ACATAGGACT AAACCAAGCA
ATCTATACAG GCGGACAGGT AAAAAACAAG ATCCAGATAT CAAAGCACAA CCTTGAAGCT
ACAAAGTATT ACTATAAAGA GATGAAAGAT GAGATTACAG CACAAGTAGT AAAAGCTTAT
TTAGATGTTT TTGTTGCATC GGCGTTAGTA GATGTTTATA AAAAAGAGTA TCAAGCTGTT
GAGTCTATCT ATAAACAACA GCAAGAATTT TTTAAAGAAG GTTTGATAAC AAAGGTTGAC
TTACTACAAT CAAAGGTAAG ACTTGCAGAA GTAGAAAGGT CTCTAACAGA AGCAAAAGGA
AATCTGAAAA TAGCACTTGC AAGACTTTCA AAGCTAACAG GAAAAAATAT ACAGGAAGAT
GAAAAATTTG AAAAACCAGT TTTAAACATA AAAGAGCTAG AAAATTATCA AGAGCTTTTA
ATGCAAGCAT TAAATAACAG AAATATAATC TCATTCTACA AAGAAAACAT AAAACAATCT
CAAGCTAAGG CAGAGATAGA AAAGGCGCAG TTTTTGCCAA AGGTTTTTGT TCAAGGTGAA
TATCTGTACA CAACACAGAG TCCATACCTT GACCCAAAAG GAAATTTTGT ATTTACAGCA
GGATTACAAG TAGAATTTCA AGGAGTGGAG CCATATTATA AATATCTGTC AGCAAAATCA
AACACGCAAA AACTTAACTA TGACCTTGAA AATATTAAAG AAAATATAAA ACTTGAGATA
AAAACAGCCT ATGAAAATTA CATCACTGCA AAACAAAACC TAAAAGTAGC AGAAGAAAGT
CTTGCCTATG CAAAAGAGTA CTTTGAGCTT GTAAAAGAGC AGTACGCTAA CCAGCTTGCA
ACAAACACAG ATTTATTAAA TGCTGAAAGC TCATATACAA AAGCCTACGA AAGCAAAGAA
ATAAACTTCT ACAATCTGCA AAAAGCATAC GTTGACCTTA TGAAGTCAGC AGGAAGATTA
GAAGAGGTAT TAAAATGA
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| Protein sequence | MKKLILPVLT AWTFSYGLTL QDAINEAVAN NPELKSYSQQ IVTSEYQLKA DENLQFPTFF
ASASEKFYNK TPMTKIPNFP ISFKQSNKDF FTFDIGLNQA IYTGGQVKNK IQISKHNLEA
TKYYYKEMKD EITAQVVKAY LDVFVASALV DVYKKEYQAV ESIYKQQQEF FKEGLITKVD
LLQSKVRLAE VERSLTEAKG NLKIALARLS KLTGKNIQED EKFEKPVLNI KELENYQELL
MQALNNRNII SFYKENIKQS QAKAEIEKAQ FLPKVFVQGE YLYTTQSPYL DPKGNFVFTA
GLQVEFQGVE PYYKYLSAKS NTQKLNYDLE NIKENIKLEI KTAYENYITA KQNLKVAEES
LAYAKEYFEL VKEQYANQLA TNTDLLNAES SYTKAYESKE INFYNLQKAY VDLMKSAGRL
EEVLK
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