| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1372 |
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| Symbol | |
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| ID | 6332074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1407646 |
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| End bp | 1409751 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657654 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001931533 |
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| Protein GI | 188997282 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000623394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGAAAT CACTTTTTGT CGCTGGAATT TTATCATTAA GTTTCTTAGC TCAAGCTGAG
GAGGTTTTAA AACTTGATAA AGTCCAGTTT ACAGCTACAA AGTCAGAAAG AGAAGAAAAG
GAAACGCCGG CATCTACGGC TACGATTACA AAAGAAGAGT TAAAATTTGA AAGAGGATTT
AATCTATCAG AAAGTTTAAG TGAAGTCTCT GGCGTTAATG CTGAAACAAA AAACGGTGGT
TATGATGTTA GATTAATCAT CAGGGGAGGG GGATTAAACG CTCCTTATGG TATAAGACAG
ATTAACATTT TATTGGACGG CGTTCCGATT ACTGACCCAG ACGGTATGAC AAGGCTTGAT
TTTGTAAATC CACAACTTAT TGACCAAATA GAAATAGTAA AGGGTCCAAA CTCAACTTTA
TATGGTGCTA ACGCAATTGG TGGTGTTGTA AACTTTATTA CTAAACCAGT ATGGACTGTC
CAAGGTTTAA AGCTTAAGAC TGGTTTCGGA AATTATAACA CACAGCTTTA CAACTTACTG
TATGGGAATA ATTACAAAGG AAAATTATTC TACTACGTTG ACATCACAAG AAGGTCAACA
GACTCATGGC GGGAATGGAA CGAGTTTAAA TCTACGCAAG CATCTTTTAA AATTGGATAT
CTCTTTGATG ATAAATCTTC CATAGAAACA TACTTTAACT ACTCAAAAGC AGATTTACAA
CTTCCTAACA GTTTAACTAA ACAACAATTT GATACAGACC CATCTAAGCA ATATAAAGAA
AATGTATGGA TACATAGTGG AAGATACAGC GAGATTTATT TCTTTAATAC GAAATATCAA
AATCAGTTAA CAGATAGCTT TACAATTAAA CCAATATTTT ACATTCAAAA GTGGAGTCAT
TACCACCCTG TAACAGGCTT CATAAACGAT GGTGGTGCTA AGGTTTTTGG TACCGATTTT
ATAACAGAGC TTAAACATTC ATTGTTTGGC ATCAACTCAA CGTTAATCTC TGGCTTTCAA
ATTCAACATG ACAAATATGA TGCAGATAAA TATACTTATG GATATGTTAT GTGTTCAACC
GGACCATGTA ATCCAAGACC AAATATAGAT GTCATAAAAT ACACACTTTC CGACCAAAAA
GGAAGATTAG CAGAAACAGA TCATAACAAA ATTCTTAAAT ACGGATTTTA CGCCCAAGAA
ACGCTTATAC CCACAAAAAA TCTCCTAATC GACATTGGAC TTAGATGGGA TGCTGTTAAA
TTTGACCTAA ATCAACAAAA CTATATTGAT TATAACTACT CACTAACAAA TGCAAGATAT
ATAATCTCTA ACAGTAATAC ACAAATTAAC AGAACGTTTA GATTTATAAG CCCAAAGATA
GGGTTTAGCT ATGCGGTAGC ACCTATAACG AATATTTATG CATCTTTTAG TGCAGGATTC
CAGACACCAC AGTGGAGTCA GCTAACCTAT AATCCAAATT TAAAAAATAC AAAAGCTTAC
CAGTATGAGA TTGGAACAAA GACAGTTAAG TCAGACGAAT ACAGTTTTAA CACAGCGTTC
TTCTTCATAG ACTCGAGGGA CGAGATAACA CAAGTGTTAG ATGGGTCAAG GACGTCTTTT
GCAAATGCTG GTAAAGTTAA TAAAAAAGGC GTTGAAATAG ACGGAAGGTT TAAAGTATAC
GATGGTTTGT ATATAGGCGG GTCCTATACA TATAGCGATT TTATTTATAA AGAATATATA
GAAGTTAAAA GGGTTGGTTC AAGCTTTCGT GCATATGATA GAAGCAATAA TAGATTGGAG
TATATTCCAA AGCATAAATA CACGTTGTAT GTTTATTACT TCCATCCATC TGGATTTAAG
GCAAAGATAG ACACTAACAC TTGGGGTCAG TACTACACAA ATGCAGCAAA TACAGGAAAA
TACAAAGGTT ATGAGTTTTT GACAAATCTG TTTTTAGGCT ATGAAAAGAA AAATTTAGAG
CTTGGTTTTA GTGTTTACAA CTTGACAGAT AAAAAATATG CAGTTGAAGT TAAAGAAGAT
TCATCTACTC CATATGTTCC TGGTGCCCCA AGAACTTATT TTGTCTATGG TAGTTATAAA
TTCTAA
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| Protein sequence | MRKSLFVAGI LSLSFLAQAE EVLKLDKVQF TATKSEREEK ETPASTATIT KEELKFERGF
NLSESLSEVS GVNAETKNGG YDVRLIIRGG GLNAPYGIRQ INILLDGVPI TDPDGMTRLD
FVNPQLIDQI EIVKGPNSTL YGANAIGGVV NFITKPVWTV QGLKLKTGFG NYNTQLYNLL
YGNNYKGKLF YYVDITRRST DSWREWNEFK STQASFKIGY LFDDKSSIET YFNYSKADLQ
LPNSLTKQQF DTDPSKQYKE NVWIHSGRYS EIYFFNTKYQ NQLTDSFTIK PIFYIQKWSH
YHPVTGFIND GGAKVFGTDF ITELKHSLFG INSTLISGFQ IQHDKYDADK YTYGYVMCST
GPCNPRPNID VIKYTLSDQK GRLAETDHNK ILKYGFYAQE TLIPTKNLLI DIGLRWDAVK
FDLNQQNYID YNYSLTNARY IISNSNTQIN RTFRFISPKI GFSYAVAPIT NIYASFSAGF
QTPQWSQLTY NPNLKNTKAY QYEIGTKTVK SDEYSFNTAF FFIDSRDEIT QVLDGSRTSF
ANAGKVNKKG VEIDGRFKVY DGLYIGGSYT YSDFIYKEYI EVKRVGSSFR AYDRSNNRLE
YIPKHKYTLY VYYFHPSGFK AKIDTNTWGQ YYTNAANTGK YKGYEFLTNL FLGYEKKNLE
LGFSVYNLTD KKYAVEVKED SSTPYVPGAP RTYFVYGSYK F
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