| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1361 |
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| Symbol | |
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| ID | 6331104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1397412 |
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| End bp | 1398542 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642657644 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_001931523 |
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| Protein GI | 188997272 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAG CGATTTTAGC ACTTGAAGAT GGTCATTTTT TCTATGGTTA TGCATTTTCC
GGCTTTAAAT TAAAAGAAAC AGACGGAGAA GTAATCTTTA ATACATCAAT GACAGGATAT
CAAGAAATCT TAACAGACCC ATCTTACAAA GGTCAAATTG TAGTTATGAC AGGTGCAGAA
ATTGGAAACT ACGGGATAAA CGACGAAGAC AGTCAATCTG ACAGAGTTTG GGTTAATGGC
TTTGTTGTAA AGGATGTCCC TGCTATTTAT TCAAATTATA GAGCAAAAAA AAGCTTAAAA
GAGTACTTGG AAGAAAGCAA CGTAATTGGA ATTTTTGGCG TAGATACAAG AGCTGTAGTT
AGAGTTTTAA GAGACTACGG AGTAATGAAA GGATACATCG GCATTGGTGA TATTTCACCC
CAAGAAGCAG TAAGAAAAGC AAGAAGCATT CCGGATATTT CAGAGCTAAA TTTAGTTAAG
GAAGTATCAA CATCAAAAGT TTATAGATGG ACTCAAAAAA GTTGGAAATG GCCAGAAGGT
TATACGGAGC AAACAGAATT TCATTATAAA GTTGCAGTAA TAGACTATGG CGTTAAAAAA
GATATTTTAA GACTTCTTGC CGATAGAAAT TTAGAGCTAA TATGTTTTCC TCACAACGTT
TCAGCAGAAG AGGTGTTAAG CATAAATCCG GATGGAATTT TCTTATCAAA TGGACCGGGA
GACCCGGCGA TTTTAACCTA TCAAATACAG CAGATAAAAA AACTTATTGC TTCAGAAAAG
CCAATTTTTG GTATATGTCT TGGACATCAG CTTTTATCTT GGGCTTTTGG AAGTAGAACT
TATAAGCTTG AATTTGGTCA TCATGGTGGA AACCATCCAG TCAAAAATCT AAAAACAGGA
AAAGTTGAAA TTACAGCACA AAACCACAAC TACGCAACGG ATGAATCTAA ACTCCCTCAA
GATGTTGAAA TTACCCATAT TAACTTAAAT GATAACACAG TAGAAGGAAT GAGACATAAA
AATTATCCTG TATTTTCAAT CCAGCATCAT CCGGAAGCAG CACCGGGACC TCATGACTCA
TTCTATATTT TTGATGAATT TTACAATTTG ATTAAAGCGT GTAAGAAGTA A
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| Protein sequence | MERAILALED GHFFYGYAFS GFKLKETDGE VIFNTSMTGY QEILTDPSYK GQIVVMTGAE
IGNYGINDED SQSDRVWVNG FVVKDVPAIY SNYRAKKSLK EYLEESNVIG IFGVDTRAVV
RVLRDYGVMK GYIGIGDISP QEAVRKARSI PDISELNLVK EVSTSKVYRW TQKSWKWPEG
YTEQTEFHYK VAVIDYGVKK DILRLLADRN LELICFPHNV SAEEVLSINP DGIFLSNGPG
DPAILTYQIQ QIKKLIASEK PIFGICLGHQ LLSWAFGSRT YKLEFGHHGG NHPVKNLKTG
KVEITAQNHN YATDESKLPQ DVEITHINLN DNTVEGMRHK NYPVFSIQHH PEAAPGPHDS
FYIFDEFYNL IKACKK
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