Gene SYO3AOP1_1353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1353 
Symbol 
ID6331219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1388731 
End bp1389465 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content29% 
IMG OID642657636 
Productprotein of unknown function DUF399 
Protein accessionYP_001931515 
Protein GI188997264 
COG category[S] Function unknown 
COG ID[COG3016] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000200413 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAAATT GCTGTCCATC TTCACTGTGT TATAATTCTA CGATTATGAA ATTATATTTA 
TCTCCAATAG CAGTTTTTAT GATAGGTTTT ATTTTAGTAT TTTCAACGTT TAAAAGCTAT
AACATTATCA TTGTTGGAGA AAATCACACA GATGAGCTTG ACCATAAAAA GCAGCTTGAA
GTAATTAAAG ATTATTATAA ATATGATAAA AAAATCATCA TTGCAATGGA GATGTTCCAG
CAACCTTTTC AGGAGTATTT GGATAAGTAT ATTCAAGGTG AGATAGATTT AAACCAGCTT
ATAGAAAAAA CAGAGTATAA AAAAAGATGG GGCTTTGATA TTAATCTATA CAAAGATATT
TTAGAGTTTG CAAAAGAAAA CAAGATAAGA ATCGTTGCTT TAAACATTCC GTCTGAGCTA
CTGTCTGAAA TTAGAAAGAA AGGATTGGAA AATATAGATT CTGCATATTT GCCAAAGCCA
ATTCCAAAGC ACACACCGGA GGAGATAAAG TTTATTGATG AAGCAATTAA AGAGCATAAA
AACATTAAAA ATAAGCAGGC TTTTTATGAT ATCCAGCTTG CCTGGGACTA CGGCATGGCA
TACAAAATAT ATGATACATA TAAAAAATAT CCTGATTATA AAATCATTGT TTTAATTGGC
AAAGGTCATG CAAACACTGT AAAAAGATTT TTGAATATTT TAGATAGCAG TTTAAAAGTT
TTTGTGTATG ATTGA
 
Protein sequence
MLNCCPSSLC YNSTIMKLYL SPIAVFMIGF ILVFSTFKSY NIIIVGENHT DELDHKKQLE 
VIKDYYKYDK KIIIAMEMFQ QPFQEYLDKY IQGEIDLNQL IEKTEYKKRW GFDINLYKDI
LEFAKENKIR IVALNIPSEL LSEIRKKGLE NIDSAYLPKP IPKHTPEEIK FIDEAIKEHK
NIKNKQAFYD IQLAWDYGMA YKIYDTYKKY PDYKIIVLIG KGHANTVKRF LNILDSSLKV
FVYD