| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1309 |
|---|
| Symbol | |
|---|
| ID | 6331867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010730 |
|---|
| Strand | + |
|---|
| Start bp | 1346560 |
|---|
| End bp | 1347678 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642657593 |
|---|
| Product | GTP-binding protein HflX |
|---|
| Protein accession | YP_001931473 |
|---|
| Protein GI | 188997222 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGGCAG TTATAGTAGC AGTAAATCTA AACGATAAAG AAGAAGATTT TGAATATAAA
ATTCAAGAGC TTGAGGGTTT GGTAGAGGCA GCAGGTGGAA CTGTTGCAGG TAAAGTGTAT
CAAAAAAGAG AATCTCCAGA CCCTGCTTAT TTTATTGGTC GTGGAAAAGT AAAAGAGATT
GCCCAGCTTG TTGAAGGGAT AGGAGCAGAT ACTGTTGTTT TTAATGTAAA TTTATCTCCT
GTTCAAATAT CTACCTTATC TAAGGAATTA AATGTTGAAG TTCTTGATAG AACAGATTTA
ATTCTTAAAA TTTTCTTGAA TAATGCAAGA ACAAAACAGG CAAAACTCCA AGTAGAGCTT
GCATACCTGC AGCATCAGCT TCCAAGAGTT TACGGCGGAA AAGGAAAAGA GCTTTCAAGA
ATTGGCGGTG GTATGAAGAC AAAAGGAGCC GGTGAAAAAC TCGGAGAGAT AAAAACAAGA
ACTATCAAAG ACAGAATAAA CAAAATTAAA AAACAACTTA AAGAAATAGA AAAACAAAGA
GAAGAGCAGA GAAAATCAAG AGAAGATAAT CCAAACATAC TAAAAGTTTC TCTTGTAGGA
TATACAAACG CAGGCAAGTC TTCACTTTTA AAAAGACTTA CAAAAAGAGA TGTATTCATA
TCTGACCAAC TTTTTGCAAC TCTTGACACA AAAACATCTT TAATCTACTT TCCGGATATA
AAAAAGAAAG TTTTAATAAC AGATACAGTT GGATTTGTTG AAGATATGCC ATCTGAAATT
ATGGATGCAT TCATGACAAC CTTAAAAGAA ATAGAAGATG CAGATGTTAT TCTTCATGTA
ATTGATATTT CAGATAAAAA TTGCATGAAA AAGAAAACAA CCGTTGAAAA CGTATTAAAA
CAGTTAAAAC TTCAAGATAA ACCAATTATA ACAGTTTTTA ACAAGATTGA CAAAGTCGTT
CCATCAAAAG ATTTGATCGA AGAAGATGTG ATGGAAAATA CCATAACTAT ATCGGCAGAA
AAAGGATGGA ATATAGATAA ACTTTTTGAT ATACTTAAAA AATATGCAAA ACAAAAGGAG
GAAAACCATG GATTGTGTTT TTTGCAAAAT AGTCAATAA
|
|---|
| Protein sequence | MKAVIVAVNL NDKEEDFEYK IQELEGLVEA AGGTVAGKVY QKRESPDPAY FIGRGKVKEI
AQLVEGIGAD TVVFNVNLSP VQISTLSKEL NVEVLDRTDL ILKIFLNNAR TKQAKLQVEL
AYLQHQLPRV YGGKGKELSR IGGGMKTKGA GEKLGEIKTR TIKDRINKIK KQLKEIEKQR
EEQRKSREDN PNILKVSLVG YTNAGKSSLL KRLTKRDVFI SDQLFATLDT KTSLIYFPDI
KKKVLITDTV GFVEDMPSEI MDAFMTTLKE IEDADVILHV IDISDKNCMK KKTTVENVLK
QLKLQDKPII TVFNKIDKVV PSKDLIEEDV MENTITISAE KGWNIDKLFD ILKKYAKQKE
ENHGLCFLQN SQ
|
|---|
| |