Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1275 |
Symbol | |
ID | 6332644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1317772 |
End bp | 1319445 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642657560 |
Product | dihydroxy-acid dehydratase |
Protein accession | YP_001931440 |
Protein GI | 188997189 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism |
COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.208811 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAGTG ATGAGATTAA AAAAGGGATA GAAAGAGCAC CACACAGAAG CTTGCTTAGA GCCTGTGGAC TTAAAGAAGA AGATTTTGGA AAACCATTTA TCGGCATTGC TAACTCTTAC ATAGATATAA TACCCGGACA CGTTCATCTT CAAGAATTTG CAAAAATCGT TAAAGAAGCT ATCAGAGAAG CAGGGGGAGT TCCATTTGAG TTTAACGTGA TCGGCGTTGA TGATGGAATA GCAATGGGAC ACTCTGGAAT GTTTTATTCG CTGCCAAGTA GGGAGCTAAT AGCTGATAGT GTAGAAACGG TTGTTCAAGC ACATAAATTA GACGGATTAG TCTTAATACC AAACTGTGAT AAGATCGTAC CTGGAATGAT AATGGCTGCT GCAAGGGTCA ATATTCCTAC AATCCTTGTA AGCGGTGGAC CTATGGCAGC AGGTCATACA TCAGATGGAA AACCAATAGA CCTTGCTACG GTTTTTGAGG CTGTCGGTGG AATAAAAAAA GGATTGATAG ATGAAAAACA ATTGATAGAC ATAGAAACTC ATGCTTGTCC TACATGTGGT TCTTGTTCTG GAATGTTTAC TGCAAACTCT ATGAACTGTC TTGCAGAAGC TCTTGGAATA GCATTACCTG GAAATGGTTC AATTCTTGCT ATAGACCCAA GAAGAAAAGA ATTGGCAAAA CAAGCAGGAA GGCAAATAGT AGAGCTTGTT AAAGCTGGAT TAAAATTTAG AGATATAGTT AATCAAGAAA CTATTGAAAA TGCATTTACT CTTGATATTG CAATGGGTGG CTCATCAAAT ACTGTTTTAC ACCTACTTGC CATTTCGCAT GAAGCTGGAA TAGAATTTCC GATGGAGAAA ATAGATGAAA TTTCACGAAA AACACCAACT CTTTGTAAAT TAGCCCCAGC TTCCCAGTAT CATATGGAAG ACTTAGATAA AGCTGGTGGA ATTTATGCAA TCTTAAAAGA GCTTTCTAAA AAGAATTTAC TACATTTAGA CAGACCAACA GTTTTGATGA AAACTATCGG AGAAGCAATA AAAGATGCAG AAATAAAAGA CACAAATGTA ATAAGACCTT TAGAAAATCC TTACAATGAA ACAGGCGGTC TTGCAGTATT GTTTGGAAAT CTTGCACCGG ATGGAGCAGT TGTAAAGGCT GCCGCAGTAG ACCCAAAAAT TTTAGTCCAC AGAGGAACAG CTGTAGTATT TGACAGTGAG GAAGAGGCAA TAGAAGGCAT TACAAACGGA AAGGTAAAAG AAGGAAATGT TGTTGTGATT AGATACGAAG GTCCAAAAGG TGGACCAGGA ATGAGAGAGA TGCTGGCTCC TACTTCAACA ATCATGGGAA TGGGACTTGG AGATAAAGTC TCATTAATCA CAGATGGAAG ATTTTCTGGG GCTACAAGAG GAGCTTGTAT AGGACATGTT TCTCCAGAAG CTGCAGCAGG TGGTCCTATC GGAATTGTCC AAAACGGAGA CGAAATTTTA ATAGATATAC CAAATAGAAA AATTGAACTT TTAATATCTG AGCAAGAGTT TGAAAGAAGA ATGAAAGAGT TTAAACCAAA GAAAAAAGAA ATACCAAGCC CATGGCTAAG AAGATACTCT AAATTTGTCA CATCGGCAAA CAAAGGTGCA ATTTTAAGCG ATGAATGCAG TTAA
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Protein sequence | MRSDEIKKGI ERAPHRSLLR ACGLKEEDFG KPFIGIANSY IDIIPGHVHL QEFAKIVKEA IREAGGVPFE FNVIGVDDGI AMGHSGMFYS LPSRELIADS VETVVQAHKL DGLVLIPNCD KIVPGMIMAA ARVNIPTILV SGGPMAAGHT SDGKPIDLAT VFEAVGGIKK GLIDEKQLID IETHACPTCG SCSGMFTANS MNCLAEALGI ALPGNGSILA IDPRRKELAK QAGRQIVELV KAGLKFRDIV NQETIENAFT LDIAMGGSSN TVLHLLAISH EAGIEFPMEK IDEISRKTPT LCKLAPASQY HMEDLDKAGG IYAILKELSK KNLLHLDRPT VLMKTIGEAI KDAEIKDTNV IRPLENPYNE TGGLAVLFGN LAPDGAVVKA AAVDPKILVH RGTAVVFDSE EEAIEGITNG KVKEGNVVVI RYEGPKGGPG MREMLAPTST IMGMGLGDKV SLITDGRFSG ATRGACIGHV SPEAAAGGPI GIVQNGDEIL IDIPNRKIEL LISEQEFERR MKEFKPKKKE IPSPWLRRYS KFVTSANKGA ILSDECS
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