Gene SYO3AOP1_1269 details

Gene Information

• Locus tag: SYO3AOP1_1269
• ID: 6331081
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sulfurihydrogenibium sp. YO3AOP1
• Kingdom: Bacteria
• Replicon accession: NC_010730
• Strand: +
• Start bp: 1312547
• End bp: 1313152
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 642657554
• Product: SNARE associated Golgi protein
• Protein accession: YP_001931434
• Protein GI: 188997183
• COG category: [S] Function unknown
• COG ID: [COG0586] Uncharacterized membrane-associated protein

Plasmid Coverage information

• Num covering plasmid clones: 49
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGAATTTT TGGACTTTAT TCTTCATATA GACAAATATT TAGACTTAAT CATACAAAAT 
TACGGCAGTT TAGTTTATCT AATTTTATTT TTTATAATCT TTGCTGAAAC GGGCTTCGTA 
ATTACTCCAT TTTTACCCGG AGACTCTCTC TTATTTGTAG TTGGAAGCTT TGCAGGAAAG 
GGAAGTTTAA ATTTTTGGAC TGTTTATTTT TTGCTATTAA TTGCAGCTAT CTTGGGAAAT 
TTAGTTAACT TTCACATAGG CTACTATTTT GGAAATAAGC TTATAGAGAA AAATCTTGTT 
AAAAAAGAGT ACATAATTCA AACTGAAAAG TTTTTTCAAA AACACGGTGG AAAGGCTGTA 
ACCATCTCAA AATTTTTACC AATTTTTAGA ACCTTCGTTC CATTTGTTGC AGGAATTGGT 
AAGATGGACA AAAGAGAATT TTTTGTCTAT AACTTTATTG GTGGTTTTTT GTGGATTACA 
CTGTTTTTAA CTCTTGGATA CTTTACAGGT AATTTACCAT TTGTAAAAGA AAACTTTAGC 
TTATTTATAT ACGGAATTAT TATAATTTCG ATCTTACCGG CAGTTGTAAA AGCAATTAAA 
AAATGA 

 

Protein sequence

MEFLDFILHI DKYLDLIIQN YGSLVYLILF FIIFAETGFV ITPFLPGDSL LFVVGSFAGK 
GSLNFWTVYF LLLIAAILGN LVNFHIGYYF GNKLIEKNLV KKEYIIQTEK FFQKHGGKAV 
TISKFLPIFR TFVPFVAGIG KMDKREFFVY NFIGGFLWIT LFLTLGYFTG NLPFVKENFS 
LFIYGIIIIS ILPAVVKAIK K