| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1259 |
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| Symbol | tgt |
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| ID | 6331446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1304419 |
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| End bp | 1305558 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642657544 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_001931424 |
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| Protein GI | 188997173 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.527316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | CTGTTTAAGT TTGAGCTTTT AAAAGAAGAT GGCAACGCAA GACTTGGAAA GATATACACA
CCTCACGGGG AAATAGACAC ACCTATCTTT ATGCCGGTAG GTACCCAGGG AACAGTTAAA
GCTATAACTA TGAAAAATCT TGAAGAGATA AACGCACAGA TAATTCTTGG AAATACATAC
CATTTATATT TAAGACCGGG CCTTGAAGTT TTAAAGAAAT TCGGCGGACT TCATAATTTT
TCATCTTGGC AAAAACCGAT TTTAACAGAC AGTGGAGGGT TTCAGGTTTT TTCTTTAGCA
GCCGGAAAGG AGAAAGAAGG TAAACAAAAG GCACAGGTTG TAATTACAGA AGAAGGCGTA
AAGTTTAAAT CTCATTTAGA TGGTTCATGG CATTTTTTCA CACCAGAGTT TGTCGTTGAA
ATTCAAGAAA TAATCGGCAG TGATATCATG ATGCCTTTAG ATGAATGCCC ACCTTATCCT
TCCAGCCATC AATACGCTTT AGAAAGTCTT AAAAGAACTA TCAGATGGCT TGAAAGGTCA
AAAAAAGCAA AGAAAAATCC AAATCAAGCA TTATTTGGAA TAATTCAAGG GTCAACTTAC
GAAGATTTAA GAAGAGAAAG TGCACTTAGG ACTGTAGAGC TTGATATGGA TGGATACTCT
ATCGGCGGTC TATCTGTTGG TGAACCAAAA GAATATATGT ATGCAATGAC CGAGATAATA
GCACCACTTC TTCCAAAAGA CAAACCAAGA TACTTAATGG GTGTTGGAAC TCCGGAAGAT
TTGCTTGAAA GTGTAGATAG AGGCATTGAT ATGTTTGACT GTGTAATGCC TACCAGAAAT
GGCAGAAATG GAACGCTTTT TACTCATTTT GGAAAAATCA ACATAAAATC AGCAAAATAC
AAACTTGACG AGACGCCAGT AGACCCATTA TGTGATTGTT ATACATGTAA AAATTTTTCA
AAAGGATATT TAAGACATCT TTACAATGCA GAAGAGATAA CAGCCTACAT ACTCGGAACC
ATCCATAATT TAAGATTTTA CCTCAGGCTA ATGGAAGATA TAAGAGAAGC TATAAAAGAA
AATAGATTTA AACAGTTTAA AAAGGAGTTT TTAGAAAGGT ACAATGGGCA GTCCGTTTAA
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| Protein sequence | MFKFELLKED GNARLGKIYT PHGEIDTPIF MPVGTQGTVK AITMKNLEEI NAQIILGNTY
HLYLRPGLEV LKKFGGLHNF SSWQKPILTD SGGFQVFSLA AGKEKEGKQK AQVVITEEGV
KFKSHLDGSW HFFTPEFVVE IQEIIGSDIM MPLDECPPYP SSHQYALESL KRTIRWLERS
KKAKKNPNQA LFGIIQGSTY EDLRRESALR TVELDMDGYS IGGLSVGEPK EYMYAMTEII
APLLPKDKPR YLMGVGTPED LLESVDRGID MFDCVMPTRN GRNGTLFTHF GKINIKSAKY
KLDETPVDPL CDCYTCKNFS KGYLRHLYNA EEITAYILGT IHNLRFYLRL MEDIREAIKE
NRFKQFKKEF LERYNGQSV
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