Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1216 |
Symbol | |
ID | 6332033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1268313 |
End bp | 1269149 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 642657500 |
Product | periplasmic solute binding protein |
Protein accession | YP_001931381 |
Protein GI | 188997130 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAGGA TAATTTTATC AGTTTTACTG CTTTTTGGTT TTTCATTTGC AGAAGTTAAA ATCACAACCA CTATAAAACC TTTAGCAGAT ATAGTAAAAG AAGTTGGGAA AGATAAAGTA AATGTGGCTT ATATAATCCC TTCAAACGTA AACTTTCATA CTTACGAATA CAAGCCGATG GATATAAAAA AAGTATATGA AAGCGATTTA TTTATATTTA TAGGCTATGG AGAGCCAAAC ATATCAAGCC TTACAAAAAA TCTTAAAAAA GAAAAATTAA TACAGATAAC AAACCTCAAA GGAATGTTTC TTTTAAAAGA AGAAGACCAT GATGAAATCC ATCCGGCAGT ATGGTTAGAC CCGGAAAATG TAAAAGTAGT AGCAAAAGCA GTTATGGATT TTTTGATATC CAAAGATAAA CAAAATGCAC AATTTTATAA ATCAAACTAT TTAGAATTTG AAAAAAAAGT AAATGAAATT TTAAACTATG GAAAAACAAA ACTTTCATCA GTTAAAAATA AATACTTTGT ATCTTATCAC TATGAATTTC CTTACTTTGT AAAAAGATTT AATCTTATCT ATCTTGCAGA GATAGAAATG GGTCATGGAA GAGAGCCATC ACCAAAACAT TTGATAGAAG TGATTCAAAA AATCAAAAAA TATAATGTAA AAGCAATTTT TACATCAAAG CAGTTTTTCA ATCCAAAGAC TGCCAATATC GTCATATCTC AAACAGGAGC AAAAGTAATT TTTCTTGACT CTATGGGTGA GACAGGAGAT TACTTAAATA TGATGAGACA CAATATAGAC AAAGTTTATG AAGGACTTAA TTTATAA
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Protein sequence | MKRIILSVLL LFGFSFAEVK ITTTIKPLAD IVKEVGKDKV NVAYIIPSNV NFHTYEYKPM DIKKVYESDL FIFIGYGEPN ISSLTKNLKK EKLIQITNLK GMFLLKEEDH DEIHPAVWLD PENVKVVAKA VMDFLISKDK QNAQFYKSNY LEFEKKVNEI LNYGKTKLSS VKNKYFVSYH YEFPYFVKRF NLIYLAEIEM GHGREPSPKH LIEVIQKIKK YNVKAIFTSK QFFNPKTANI VISQTGAKVI FLDSMGETGD YLNMMRHNID KVYEGLNL
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