Gene SYO3AOP1_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1216 
Symbol 
ID6332033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1268313 
End bp1269149 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content28% 
IMG OID642657500 
Productperiplasmic solute binding protein 
Protein accessionYP_001931381 
Protein GI188997130 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAGGA TAATTTTATC AGTTTTACTG CTTTTTGGTT TTTCATTTGC AGAAGTTAAA 
ATCACAACCA CTATAAAACC TTTAGCAGAT ATAGTAAAAG AAGTTGGGAA AGATAAAGTA
AATGTGGCTT ATATAATCCC TTCAAACGTA AACTTTCATA CTTACGAATA CAAGCCGATG
GATATAAAAA AAGTATATGA AAGCGATTTA TTTATATTTA TAGGCTATGG AGAGCCAAAC
ATATCAAGCC TTACAAAAAA TCTTAAAAAA GAAAAATTAA TACAGATAAC AAACCTCAAA
GGAATGTTTC TTTTAAAAGA AGAAGACCAT GATGAAATCC ATCCGGCAGT ATGGTTAGAC
CCGGAAAATG TAAAAGTAGT AGCAAAAGCA GTTATGGATT TTTTGATATC CAAAGATAAA
CAAAATGCAC AATTTTATAA ATCAAACTAT TTAGAATTTG AAAAAAAAGT AAATGAAATT
TTAAACTATG GAAAAACAAA ACTTTCATCA GTTAAAAATA AATACTTTGT ATCTTATCAC
TATGAATTTC CTTACTTTGT AAAAAGATTT AATCTTATCT ATCTTGCAGA GATAGAAATG
GGTCATGGAA GAGAGCCATC ACCAAAACAT TTGATAGAAG TGATTCAAAA AATCAAAAAA
TATAATGTAA AAGCAATTTT TACATCAAAG CAGTTTTTCA ATCCAAAGAC TGCCAATATC
GTCATATCTC AAACAGGAGC AAAAGTAATT TTTCTTGACT CTATGGGTGA GACAGGAGAT
TACTTAAATA TGATGAGACA CAATATAGAC AAAGTTTATG AAGGACTTAA TTTATAA
 
Protein sequence
MKRIILSVLL LFGFSFAEVK ITTTIKPLAD IVKEVGKDKV NVAYIIPSNV NFHTYEYKPM 
DIKKVYESDL FIFIGYGEPN ISSLTKNLKK EKLIQITNLK GMFLLKEEDH DEIHPAVWLD
PENVKVVAKA VMDFLISKDK QNAQFYKSNY LEFEKKVNEI LNYGKTKLSS VKNKYFVSYH
YEFPYFVKRF NLIYLAEIEM GHGREPSPKH LIEVIQKIKK YNVKAIFTSK QFFNPKTANI
VISQTGAKVI FLDSMGETGD YLNMMRHNID KVYEGLNL