| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1214 |
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| Symbol | |
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| ID | 6332560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | + |
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| Start bp | 1265594 |
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| End bp | 1266958 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642657498 |
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| Product | UDP-N-acetylmuramate/alanine ligase |
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| Protein accession | YP_001931379 |
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| Protein GI | 188997128 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0773] UDP-N-acetylmuramate-alanine ligase |
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| TIGRFAM ID | [TIGR01082] UDP-N-acetylmuramate--alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTAGAG GTAAAGTTAG AAAAATCCAT TTTATTGGAA TTGGCGGTTC TGGAATGAAC
GGCATAGCTG AATTATTGCT AAACCAAGGA TACACGATAA CAGGTTCAGA TTTAAAAGAG
TCTCCAACGA TTGAAAGATT GAGAAATCTT GGAGCAAAAA TATTTATAGG GCATAGTGAA
GAAAATGTTA AAGATGCGGA TGTTGTAGTG TATTCATCAG CTGTAAAACC CGATAACCCG
GAAATGATAA AGGCAAAACA GCTTGGAATT CCGACAATAC CAAGAGGGGA GATGCTTGCT
GAATTAATGA GATTCAAATA TGGGATAGCC ATTGCCGGAA GTCACGGAAA AACAACAACA
ACATCAATGG TAGGAACCGT ACTTGGAAAA ACCGGATTTG ACCCAACGGT TGTAATTGGC
GGTAAGTTGG AAGCATACGG CAGTAATGCA AAGCTTGGAA GAGGAGAGTT CTTAGTCACA
GAATCAGATG AAAGCGATGG TTCTTTTTTA AAATTAACTC CGACCATTGT TTCTATAAAC
AATATAGATT TAGAACATAT AGGATTTTAT AAAGACTTAG AAGACATTAA AAAAGCTTTT
GTTGCCTTTG CAAATAAAGT ACCATTTTAT GGAGCAGCAG CTGTTAACAT AGATGATGAA
AACGTAAAAA GCATTTTGCC TTACATTGAA AGAAAAGTTA TAAAATTTGG ATTTTCAGAA
GATGCAGATA TTAGAGCTTA TGATGTGAGA TTAGAAAATG GTAGATACAA ATTTAAAGTC
AATGATTTTG GAGAGATACA CCTTTCAGTT CCAGGCATTC ATAATGTTTA TAATGCCCTT
GCTACAATAG CAATATGTAA TGAGCTTAGC GTTCCTTTTT GTGTCATAAA AGAAAGCTTA
GAAAACTTTA AAAATGCAAA AAGAAGGTTT GAGATAAAAT ACTCCAACGA TATCATTGTC
ATTGACGATT ACGCACACCA TCCAACAGAA CTAAAAGCAA CATTATCAGC AGCAAGAGAT
TATTTTAAAG ACAGAAGAAT AATAGCAGTA TTTCAACCTC ATAGATATTC AAGATTAAAT
GCCTTATTTG AAGAATTTGC GAAAGCGTTT GATATTCCGG ATATTACTAT CGTAACGGAA
GTTTATTCAG CAGGCGAAAG TCCAATTGAA AATGTTTCAG GCGAAAAATT GGCAGAGAAA
ATCAGGGAGT ATGGAAATAA TGTTTATTAT GTATCAAATT TGGAAGAGGC AGAAAATCTG
TTAAAAAATA TCATTCAAAA AGGTGATGTA ATACTAACCC TCGGAGCAGG AAGCATTACT
CAGCTTAGCG ACACTTTAGC TAAATATTTA TCAGAAAAAG AGTAA
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| Protein sequence | MFRGKVRKIH FIGIGGSGMN GIAELLLNQG YTITGSDLKE SPTIERLRNL GAKIFIGHSE
ENVKDADVVV YSSAVKPDNP EMIKAKQLGI PTIPRGEMLA ELMRFKYGIA IAGSHGKTTT
TSMVGTVLGK TGFDPTVVIG GKLEAYGSNA KLGRGEFLVT ESDESDGSFL KLTPTIVSIN
NIDLEHIGFY KDLEDIKKAF VAFANKVPFY GAAAVNIDDE NVKSILPYIE RKVIKFGFSE
DADIRAYDVR LENGRYKFKV NDFGEIHLSV PGIHNVYNAL ATIAICNELS VPFCVIKESL
ENFKNAKRRF EIKYSNDIIV IDDYAHHPTE LKATLSAARD YFKDRRIIAV FQPHRYSRLN
ALFEEFAKAF DIPDITIVTE VYSAGESPIE NVSGEKLAEK IREYGNNVYY VSNLEEAENL
LKNIIQKGDV ILTLGAGSIT QLSDTLAKYL SEKE
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