Gene SYO3AOP1_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_1138 
Symbol 
ID6332479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp1188530 
End bp1189372 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content30% 
IMG OID642657422 
Producthypothetical protein 
Protein accessionYP_001931306 
Protein GI188997055 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.194098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGCG TAGAAAAGTT AAAAAACTTT AAATCTTTTA AAATTCCTGT AAATCCAACA 
GACATTTACA AGTACAAGCT CAAAAACTTT AGACCTAAAA TAAAATTACA GTTTGAAACA
AGTAAATACA TTGTTAAAAC AGCAGAATCT CATACAGAGC TGTTAAAAGC TTTAAAATTA
AGGCATAGAG TATTTTTTGA AAAGACAAAG AAAATAGTCA AATTAGACAG TGATAAATTC
GATATGATAG CAGACCATCT ACTGCTAATA GATAAAAATT CAAAAGAAGT GGTTGGAACA
TATCGTTTGA TTGGGTCAAA CTTCTCTAAG GAGTTTTATA CAGAATCTGA ATTTTTTATT
GATAAGATTA AAAGCATAAA AGACCCAATA CTTGAAATGG GAAGGGCATG TATAGATAGC
AATCACAGAA ATGGAATAGC ATTGTCACTG CTTTGGAGAG GTATCAGCCA GTATGTTTAC
ACAGGTGGAT ATAAGTATCT CTTTGGATGT TCAAGCATTT TTCAAATAGA TATAGAAAAA
GTAGCATTTA TTTACATGTA TCTAAAATCA AAATACTACC TGTCAGAGTT AGAAGCTTAC
CCAAAGTTTA ACTACAAAAT TTTAAGCTTG AAGAAGTATA CAGAATTTTT AGAATACATA
GAACCAAACT ACGAAAAAGC ATCAAATTAT ATTCCGCCAC TCCTTGAAGG ATATTTAAAA
GCAGGTGCAA AGGTTTGTAG TGAGCCAGCA TTGGATAAAA AATTTAGATG TATTGACTTT
GTAACAATCT TAGACACAGA AAATTTAACT AAAACGTTTG AAAAGAAATA CAAGAAGGAA
TGA
 
Protein sequence
MIGVEKLKNF KSFKIPVNPT DIYKYKLKNF RPKIKLQFET SKYIVKTAES HTELLKALKL 
RHRVFFEKTK KIVKLDSDKF DMIADHLLLI DKNSKEVVGT YRLIGSNFSK EFYTESEFFI
DKIKSIKDPI LEMGRACIDS NHRNGIALSL LWRGISQYVY TGGYKYLFGC SSIFQIDIEK
VAFIYMYLKS KYYLSELEAY PKFNYKILSL KKYTEFLEYI EPNYEKASNY IPPLLEGYLK
AGAKVCSEPA LDKKFRCIDF VTILDTENLT KTFEKKYKKE