Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_1138 |
Symbol | |
ID | 6332479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 1188530 |
End bp | 1189372 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 642657422 |
Product | hypothetical protein |
Protein accession | YP_001931306 |
Protein GI | 188997055 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.194098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGCG TAGAAAAGTT AAAAAACTTT AAATCTTTTA AAATTCCTGT AAATCCAACA GACATTTACA AGTACAAGCT CAAAAACTTT AGACCTAAAA TAAAATTACA GTTTGAAACA AGTAAATACA TTGTTAAAAC AGCAGAATCT CATACAGAGC TGTTAAAAGC TTTAAAATTA AGGCATAGAG TATTTTTTGA AAAGACAAAG AAAATAGTCA AATTAGACAG TGATAAATTC GATATGATAG CAGACCATCT ACTGCTAATA GATAAAAATT CAAAAGAAGT GGTTGGAACA TATCGTTTGA TTGGGTCAAA CTTCTCTAAG GAGTTTTATA CAGAATCTGA ATTTTTTATT GATAAGATTA AAAGCATAAA AGACCCAATA CTTGAAATGG GAAGGGCATG TATAGATAGC AATCACAGAA ATGGAATAGC ATTGTCACTG CTTTGGAGAG GTATCAGCCA GTATGTTTAC ACAGGTGGAT ATAAGTATCT CTTTGGATGT TCAAGCATTT TTCAAATAGA TATAGAAAAA GTAGCATTTA TTTACATGTA TCTAAAATCA AAATACTACC TGTCAGAGTT AGAAGCTTAC CCAAAGTTTA ACTACAAAAT TTTAAGCTTG AAGAAGTATA CAGAATTTTT AGAATACATA GAACCAAACT ACGAAAAAGC ATCAAATTAT ATTCCGCCAC TCCTTGAAGG ATATTTAAAA GCAGGTGCAA AGGTTTGTAG TGAGCCAGCA TTGGATAAAA AATTTAGATG TATTGACTTT GTAACAATCT TAGACACAGA AAATTTAACT AAAACGTTTG AAAAGAAATA CAAGAAGGAA TGA
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Protein sequence | MIGVEKLKNF KSFKIPVNPT DIYKYKLKNF RPKIKLQFET SKYIVKTAES HTELLKALKL RHRVFFEKTK KIVKLDSDKF DMIADHLLLI DKNSKEVVGT YRLIGSNFSK EFYTESEFFI DKIKSIKDPI LEMGRACIDS NHRNGIALSL LWRGISQYVY TGGYKYLFGC SSIFQIDIEK VAFIYMYLKS KYYLSELEAY PKFNYKILSL KKYTEFLEYI EPNYEKASNY IPPLLEGYLK AGAKVCSEPA LDKKFRCIDF VTILDTENLT KTFEKKYKKE
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