| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1050 |
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| Symbol | |
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| ID | 6332781 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1087540 |
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| End bp | 1088856 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 642657338 |
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| Product | MiaB-like tRNA modifying enzyme |
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| Protein accession | YP_001931223 |
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| Protein GI | 188996972 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01579] MiaB-like tRNA modifying enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 62 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGG AAAATAAAGG TTTGAAGGTA GCTTTTGCAA CCCTTGGTTG TAGAATGAAC
CAATTTGAAA CATCTGCATT GGAAGAACAA TTTCAAGTAA AAGGTTATAG TATTACAGAC
TTTGAAGATG TAGCAGATAT ATATGTAATA AATACATGCA CTGTCACGAA CGATGCAGAT
AGAACTTCAA GAAAAATTAT AAGACAGGCA AAAAGAAGAA ATCCTAATGC AGTTGTAGTT
GCTACAGGTT GTTATGCCCA GGTATCTCCA GAAGAGCTTG CAAAGATGGA AGAGATAGAC
TTGGTTATAG GCAATTCTCA TAAAACCGCT GTTTTTGAGA TAGTAGAAAA TTATATAAAT
GAAAAATTTG AAAACAAAGT TTTTATAGAA AACATATTTA GAGAAAATCA GTTTAAAACC
TTTCAAATCA GTACCTTTTT TGAAGGAGCA AGACCTATAA TCAAAGTCCA GGAAGGTTGT
AATAGCTTTT GTAGTTTTTG CATCATTCCA TTTGCAAGAG GAAAGGTAAG AAGTGCAAAA
ATAGATGAGA TAGTAAATCA AGTTAAAATA TTAGTAGACA AAGGATTTAA AGAGATTGTT
CTAACAGGAA CGCAGCTATC TCAATACGGA TACGACCATA AAGAAGGAAC CCTTTATGAC
CTTTTAAAAA ATCTTGTCAA GATAGAAAAT CTATACAGGA TTAGACTTTC ATCTATGGGA
ATAAATGAGC TTGATGATAA ATTTATAGAC TTTTTAACAT CAGAAGAAAA AATAGCACCA
CACTTTCACC TATCCATCCA GTCAGCAGAT GACAAAGTTT TAAGAGATAT GAAAAGAAAC
TATACAGTAA AAGAGTATAT GGAAAAAGTA GAAAAGATAA TATCAAAAAG ACCAGAAACA
GCAATTGGAA CGGATATAAT AACAGGATTT CCAACAGAAG ATAAAACGGC ATTTTTAAAC
ACTGTAAAGA CAATAAATAA TATTCCTTTT GCATACATAC ATGTGTTTAC ATATTCTCAG
AGAGATGGAA CAACAGCTGT AAAATTTGGA GATAAAGTCC TTCCAGAAGA AAAGAAAGAA
AGGACAAGAA TACTCAGAGA GATAAGCTAT CAGAAAAACT ATGAATTTAG AAAGAGATTT
ATAAACAAAG ATTTGGAATT TTTAATTATC TCTGAAAGAG ATGACTATAA AATAGCAGTT
ACAGGAAATT ACATTCATGC AAAAATAAAG ACAGAAAAGG CTATCAACAC AATAATTAAA
GCAAACCTAA CAGAAATAGG AAAAGAAAGA GAAGAAAATA CAGCAGTAGA GGTATAA
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| Protein sequence | MKLENKGLKV AFATLGCRMN QFETSALEEQ FQVKGYSITD FEDVADIYVI NTCTVTNDAD
RTSRKIIRQA KRRNPNAVVV ATGCYAQVSP EELAKMEEID LVIGNSHKTA VFEIVENYIN
EKFENKVFIE NIFRENQFKT FQISTFFEGA RPIIKVQEGC NSFCSFCIIP FARGKVRSAK
IDEIVNQVKI LVDKGFKEIV LTGTQLSQYG YDHKEGTLYD LLKNLVKIEN LYRIRLSSMG
INELDDKFID FLTSEEKIAP HFHLSIQSAD DKVLRDMKRN YTVKEYMEKV EKIISKRPET
AIGTDIITGF PTEDKTAFLN TVKTINNIPF AYIHVFTYSQ RDGTTAVKFG DKVLPEEKKE
RTRILREISY QKNYEFRKRF INKDLEFLII SERDDYKIAV TGNYIHAKIK TEKAINTIIK
ANLTEIGKER EENTAVEV
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