| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_1012 |
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| Symbol | |
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| ID | 6331239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 1048433 |
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| End bp | 1048897 |
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| Gene Length | 465 bp |
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| Protein Length | 154 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642657300 |
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| Product | fimbrial protein |
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| Protein accession | YP_001931185 |
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| Protein GI | 188996934 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 7.8428e-16 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGAA TTTTTAAGTC AATTGCAGAA GCAATGTCTC TCACAGCAAA AATTGAAGGT
GAGAGAAGAA AGGAAAAAGG TTTTACACTC ATTGAGTTGC TCATCGTTAT CGCTATCATT
GCGATCCTTG CATCTATCGC TATTCCACAG TACATGAAGT ACCAAAGGAA AGCTAAAGTT
AGCTCTTACG CAGAACCAAT AGCAAGGGCA TGTTTGATGG ACTTAGCTGC TTATTGCGTT
GAGAATCCAA GTGCAACTTT GTCAATTGAT TCTACAATAG CTAAAAATTG TACAACAACA
ACAGTTACAC CAGGGGGAAC AGTCAATCTT AATGGTGGCG GGTTTGTGTG TGATAATACA
GGATCTATTA CAGCAGGTAG CGTTACTGCA ACACTTGGAA ATATAAGTGA TTATACTGCA
TCATGTACTG TAATAAATAA CGGATTTAAG TGTACAGTTC AATAA
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| Protein sequence | MERIFKSIAE AMSLTAKIEG ERRKEKGFTL IELLIVIAII AILASIAIPQ YMKYQRKAKV
SSYAEPIARA CLMDLAAYCV ENPSATLSID STIAKNCTTT TVTPGGTVNL NGGGFVCDNT
GSITAGSVTA TLGNISDYTA SCTVINNGFK CTVQ
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