| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SYO3AOP1_0957 |
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| Symbol | |
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| ID | 6332058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010730 |
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| Strand | - |
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| Start bp | 990506 |
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| End bp | 990991 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 642657248 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001931134 |
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| Protein GI | 188996883 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000000843973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGAAAA TTAGGAAAGG TGATTTTAGT AGTTTACCAA GAATAATATT GTTTAGTGTC
TCGTGCTTTT TGCTTTCTTC GTGTTCACTT CCAAAAATTA TAGTATACGA TGACCCATTA
TCAGCTAAAG AACATAACGA CCTTGGAGTT GTTTATTACA AAAAAGGAGA ATACGATTTA
GCAGAAAAAG AATTTTTAAA AGCTTTAAAG AAAGATAAAA ATTTTTATTT AGCATACTTT
AACCTTGGCA ATCTTTATTA CAAGAAAGGT GATGTAGAAA AATCTATAGA ATTTTTTAAA
AAAGCTTTAG AGATAAATAA AAATGACGAT GTTTTAAATA ACTTAGGATA CGTATTTTTA
GAAATAAAGG ATTGTAAAAA TGCGAAATAT TATTTAAACC AGATTAAAAA TATAGAAAAC
AAACCTGAAT ATAAAGATAC CTATGAAAAA TTTTTAAAAA TTTGCAATAG TAATCAAGAT
GAGTGA
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| Protein sequence | MGKIRKGDFS SLPRIILFSV SCFLLSSCSL PKIIVYDDPL SAKEHNDLGV VYYKKGEYDL
AEKEFLKALK KDKNFYLAYF NLGNLYYKKG DVEKSIEFFK KALEINKNDD VLNNLGYVFL
EIKDCKNAKY YLNQIKNIEN KPEYKDTYEK FLKICNSNQD E
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